RNF212: A Key Regulator of Meiotic Recombination and Crossover Formation
Comprehensive genomic and functional analysis of the RNF212 gene, its role in meiosis, and association with human fertility disorders.
Gene Information Card
| Symbol | RNF212 |
|---|---|
| Full Name | Ring Finger Protein 212 |
| Gene Type | Protein coding |
| Chromosomal Location | 4p16.3 |
| NCBI Gene ID | 285498 ncbi.nlm.nih.gov/gene/285498 |
| Ensembl ID | ENSG00000138653 |
| UniProt ID | Q5VXU3 |
| OMIM ID | 612041 |
| HGNC ID | 21158 |
| Aliases | ZHP-3, C4orf18, HSPC250 |
Description
RNF212 (Ring Finger Protein 212) encodes a RING finger domain-containing protein that is essential for meiotic recombination. It acts as a dosage-sensitive regulator of crossover formation during meiosis, promoting the stabilization of crossover-specific recombination intermediates. RNF212 is orthologous to the yeast Zip3 and C. elegans ZHP-3 proteins. The protein localizes to meiotic chromosomes and is required for the formation of synaptonemal complex and crossover interference. Variants in RNF212 have been associated with human infertility and reproductive aging.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Infertility (male and female) | Disruption of meiotic crossover formation due to RNF212 deficiency leads to meiotic arrest and gametogenesis failure. | OMIM #612041; PMID: 23334420 |
| Premature ovarian failure (POF) | RNF212 variants may impair oocyte meiotic recombination, accelerating oocyte depletion. | ClinVar; PMID: 23334420 |
| Azoospermia | Loss-of-function mutations in RNF212 cause meiotic arrest in spermatocytes, resulting in non-obstructive azoospermia. | OMIM #612041; PMID: 23334420 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Testis | 12.5 | High |
| Ovary | 4.2 | Medium |
| Fallopian tube | 3.1 | Medium |
| Brain (cerebellum) | 1.8 | Low |
| Heart | 0.5 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Spermatocytes (primary) | 15.0 | High expression during meiotic prophase I |
| Oocytes (germinal vesicle) | 8.5 | Moderate expression |
| HEK293 | 0.2 | Very low expression |
| K562 | 0.1 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1A>G (p.Met1?) | Missense/Start loss | <0.01% | Loss of protein expression; associated with azoospermia |
| c.202C>T (p.Arg68Trp) | Missense | 0.02% | Reduced crossover formation; linked to infertility |
| c.415G>A (p.Gly139Ser) | Missense | 0.01% | Impaired RNF212 localization to meiotic chromosomes |
Mutation functional classification
Loss of Function (LOF)
Loss-of-function mutations (e.g., start codon loss, nonsense) lead to absence of functional RNF212 protein, causing meiotic arrest and infertility.
Gain of Function (GOF)
No gain-of-function mutations have been reported for RNF212.
Dominant Negative (DN)
Some missense variants (e.g., p.Arg68Trp) may act in a dominant-negative manner by interfering with wild-type RNF212 function in crossover stabilization.
View complete mutation data:
Gene Ontology (GO)
| • nucleus (GO:0005634) | • zinc ion binding (GO:0008270) |
| • reciprocal meiotic recombination (GO:0007131) | • condensed nuclear chromosome (GO:0000794) |
| • protein binding (GO:0005515) | • meiotic crossover formation (GO:0061774) |
Pathways
• Meiotic recombination (Reactome: R-HSA-912446)
• Synaptonemal complex assembly (Reactome: R-HSA-1500620)
• Formation of crossover intermediates (Reactome: R-HSA-5696398)
Protein Summary
RNF212 is a 305-amino acid RING finger protein that localizes to meiotic chromosomes. It contains a RING-type zinc finger domain (residues 30-70) required for E3 ubiquitin ligase activity and protein-protein interactions. The protein is essential for stabilizing crossover-specific recombination intermediates during meiosis. RNF212 interacts with other meiotic proteins such as MSH4, MSH5, and SYCP1. Its expression is highest in testis and ovary, consistent with its role in gametogenesis. Structural studies indicate that the RING domain coordinates two zinc ions and mediates ubiquitination of target proteins involved in crossover designation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| RNF212 Knockout HEK293 Cell Line | EDJ-KQ15108 | Human | 285498 | Details Get a Quote |
| RNF212B Knockout HEK293 Cell Line | EDJ-KQ15109 | Human | 100507650 | Details Get a Quote |
| RNF212 Knockout A-549 Cell Line | EDJ-KQ44454 | Human | 285498 | Details Get a Quote |
| RNF212 Knockout HeLa Cell Line | EDJ-KQ45696 | Human | 285498 | Details Get a Quote |
| RNF212B Knockout HeLa Cell Line | EDJ-KQ60928 | Human | 100507650 | Details Get a Quote |
| RNF212B Knockout A-549 Cell Line | EDJ-KQ69403 | Human | 100507650 | Details Get a Quote |
| RNF212 Knockout HCT 116 Cell Line | EDJ-KQ76361 | Human | 285498 | Details Get a Quote |
| RNF212B Knockout HCT 116 Cell Line | EDJ-KQ77754 | Human | 100507650 | Details Get a Quote |
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