PTPRK: Protein Tyrosine Phosphatase Receptor Type K

A receptor-type protein tyrosine phosphatase implicated in cell adhesion, growth regulation, and cancer

Gene Information Card

Symbol PTPRK
Full Name Protein Tyrosine Phosphatase Receptor Type K
Gene Type protein-coding
Chromosomal Location 6q22.33
NCBI Gene ID 5796 ncbi.nlm.nih.gov/gene/5796
Ensembl ID ENSG00000112658
UniProt ID Q15262
OMIM ID 176895
HGNC ID 9665
Aliases R-PTP-kappa, RPTPK, PTPkappa

Description

PTPRK encodes a member of the receptor-type protein tyrosine phosphatase (RPTP) family. The protein contains an extracellular region with MAM, Ig-like, and fibronectin type III domains, a single transmembrane segment, and two tandem cytoplasmic phosphatase domains. It functions as a homophilic cell adhesion molecule and dephosphorylates substrates such as EGFR, STAT3, and β-catenin, thereby regulating cell proliferation, migration, and adhesion. PTPRK is considered a tumor suppressor in several cancers, including colorectal, breast, and lymphoma.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Colorectal cancer Loss of PTPRK expression leads to increased EGFR and STAT3 signaling, promoting tumor growth PMID: 23542218; COSMIC mutation data
Breast cancer PTPRK downregulation correlates with poor prognosis; re-expression suppresses cell migration PMID: 25670082
Hodgkin lymphoma Inactivating mutations and deletions of PTPRK are recurrent, implicating it as a tumor suppressor PMID: 24755471
Lung cancer Epigenetic silencing of PTPRK contributes to oncogenic signaling PMID: 27323850

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 18.5 Medium
Lung 12.3 Medium
Colon 15.7 Medium
Breast 9.8 Low
Liver 6.2 Low
Kidney 14.1 Medium
Skin 11.0 Medium
Cell Line Expression
Cell Line nTPM Notes
HEK 293 22.4 High expression
HeLa 15.1 Medium expression
MCF7 8.3 Low expression
A549 12.6 Medium expression
HCT116 18.9 High expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412*) Nonsense <1% Loss of function; truncation of phosphatase domain
c.567_568del (p.Glu190fs) Frameshift <1% Loss of function; premature stop
c.2101G>A (p.Gly701Arg) Missense <1% Likely damaging; affects catalytic activity
c.789+1G>A Splice donor <1% Splice disruption; loss of function
Mutation functional classification

Loss of Function (LOF)

Nonsense, frameshift, and splice-site mutations that truncate or disrupt the phosphatase domain are classified as loss-of-function, consistent with a tumor suppressor role.

Gain of Function (GOF)

No gain-of-function mutations have been reported for PTPRK.

Dominant Negative (DN)

No dominant-negative mutations have been characterized for PTPRK.

Pathways

EGFR tyrosine kinase inhibitor resistance (Reactome: R-HSA-5637815)
Signaling by Receptor Tyrosine Kinases (Reactome: R-HSA-9006934)
Cell junction organization (Reactome: R-HSA-446728)

Protein Summary

PTPRK is a transmembrane receptor-type protein tyrosine phosphatase that mediates homophilic cell-cell adhesion and negatively regulates growth factor signaling by dephosphorylating key substrates such as EGFR, STAT3, and β-catenin. Its extracellular region contains MAM, Ig-like, and fibronectin type III domains, while the cytoplasmic region harbors two phosphatase domains (D1 catalytic, D2 regulatory). Loss of PTPRK expression or function is associated with multiple cancers, supporting its role as a tumor suppressor.

Related Products

Product name Cat.No. Species Gene ID
PTPRK Knockout HEK293 Cell Line EDJ-KQ5604 Human 5796 Details Get a Quote
PTPRK Knockout A-549 Cell Line EDJ-KQ27630 Human 5796 Details Get a Quote
PTPRK Knockout HCT 116 Cell Line EDJ-KQ28888 Human 5796 Details Get a Quote
PTPRK Knockout HeLa Cell Line EDJ-KQ28889 Human 5796 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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