PTPRK: Protein Tyrosine Phosphatase Receptor Type K
A receptor-type protein tyrosine phosphatase implicated in cell adhesion, growth regulation, and cancer
Gene Information Card
| Symbol | PTPRK |
|---|---|
| Full Name | Protein Tyrosine Phosphatase Receptor Type K |
| Gene Type | protein-coding |
| Chromosomal Location | 6q22.33 |
| NCBI Gene ID | 5796 ncbi.nlm.nih.gov/gene/5796 |
| Ensembl ID | ENSG00000112658 |
| UniProt ID | Q15262 |
| OMIM ID | 176895 |
| HGNC ID | 9665 |
| Aliases | R-PTP-kappa, RPTPK, PTPkappa |
Description
PTPRK encodes a member of the receptor-type protein tyrosine phosphatase (RPTP) family. The protein contains an extracellular region with MAM, Ig-like, and fibronectin type III domains, a single transmembrane segment, and two tandem cytoplasmic phosphatase domains. It functions as a homophilic cell adhesion molecule and dephosphorylates substrates such as EGFR, STAT3, and β-catenin, thereby regulating cell proliferation, migration, and adhesion. PTPRK is considered a tumor suppressor in several cancers, including colorectal, breast, and lymphoma.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Colorectal cancer | Loss of PTPRK expression leads to increased EGFR and STAT3 signaling, promoting tumor growth | PMID: 23542218; COSMIC mutation data |
| Breast cancer | PTPRK downregulation correlates with poor prognosis; re-expression suppresses cell migration | PMID: 25670082 |
| Hodgkin lymphoma | Inactivating mutations and deletions of PTPRK are recurrent, implicating it as a tumor suppressor | PMID: 24755471 |
| Lung cancer | Epigenetic silencing of PTPRK contributes to oncogenic signaling | PMID: 27323850 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 18.5 | Medium |
| Lung | 12.3 | Medium |
| Colon | 15.7 | Medium |
| Breast | 9.8 | Low |
| Liver | 6.2 | Low |
| Kidney | 14.1 | Medium |
| Skin | 11.0 | Medium |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 22.4 | High expression |
| HeLa | 15.1 | Medium expression |
| MCF7 | 8.3 | Low expression |
| A549 | 12.6 | Medium expression |
| HCT116 | 18.9 | High expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1234C>T (p.Arg412*) | Nonsense | <1% | Loss of function; truncation of phosphatase domain |
| c.567_568del (p.Glu190fs) | Frameshift | <1% | Loss of function; premature stop |
| c.2101G>A (p.Gly701Arg) | Missense | <1% | Likely damaging; affects catalytic activity |
| c.789+1G>A | Splice donor | <1% | Splice disruption; loss of function |
Mutation functional classification
Loss of Function (LOF)
Nonsense, frameshift, and splice-site mutations that truncate or disrupt the phosphatase domain are classified as loss-of-function, consistent with a tumor suppressor role.
Gain of Function (GOF)
No gain-of-function mutations have been reported for PTPRK.
Dominant Negative (DN)
No dominant-negative mutations have been characterized for PTPRK.
View complete mutation data:
Gene Ontology (GO)
Pathways
• EGFR tyrosine kinase inhibitor resistance (Reactome: R-HSA-5637815)
• Signaling by Receptor Tyrosine Kinases (Reactome: R-HSA-9006934)
• Cell junction organization (Reactome: R-HSA-446728)
Protein Summary
PTPRK is a transmembrane receptor-type protein tyrosine phosphatase that mediates homophilic cell-cell adhesion and negatively regulates growth factor signaling by dephosphorylating key substrates such as EGFR, STAT3, and β-catenin. Its extracellular region contains MAM, Ig-like, and fibronectin type III domains, while the cytoplasmic region harbors two phosphatase domains (D1 catalytic, D2 regulatory). Loss of PTPRK expression or function is associated with multiple cancers, supporting its role as a tumor suppressor.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PTPRK Knockout HEK293 Cell Line | EDJ-KQ5604 | Human | 5796 | Details Get a Quote |
| PTPRK Knockout A-549 Cell Line | EDJ-KQ27630 | Human | 5796 | Details Get a Quote |
| PTPRK Knockout HCT 116 Cell Line | EDJ-KQ28888 | Human | 5796 | Details Get a Quote |
| PTPRK Knockout HeLa Cell Line | EDJ-KQ28889 | Human | 5796 | Details Get a Quote |
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