PTPRB: Protein Tyrosine Phosphatase Receptor Type B

A key regulator of vascular development and angiogenesis

Gene Information Card

Symbol PTPRB
Full Name Protein Tyrosine Phosphatase Receptor Type B
Gene Type protein-coding
Chromosomal Location 12q15
NCBI Gene ID 5787 ncbi.nlm.nih.gov/gene/5787
Ensembl ID ENSG00000127328
UniProt ID P23467
OMIM ID 176882
HGNC ID 9665
Aliases HPTP-BETA, R-PTP-BETA, VE-PTP

Description

PTPRB encodes a member of the protein tyrosine phosphatase (PTP) family, specifically a receptor-type PTP. The protein is a transmembrane receptor that contains an extracellular region with fibronectin type III repeats and a cytoplasmic region with two tandem catalytic domains. It is predominantly expressed in endothelial cells and plays a critical role in vascular development, angiogenesis, and regulation of endothelial cell contacts. PTPRB dephosphorylates tyrosine residues on target proteins, including TEK/Tie2, and modulates signaling pathways involved in blood vessel formation and maintenance.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Hereditary Hemorrhagic Telangiectasia (HHT) Loss-of-function mutations in PTPRB impair endothelial cell signaling, leading to vascular malformations PMID: 25446529
Capillary Malformation-Arteriovenous Malformation (CM-AVM) PTPRB mutations disrupt vascular development pathways PMID: 28902141
Cancer (various) Altered PTPRB expression affects tumor angiogenesis and metastasis COSMIC database

Expression Profile

Tissue Expression
Tissue nTPM level
Lung 12.5 Medium
Heart 10.2 Medium
Placenta 8.9 Medium
Kidney 7.3 Low
Brain 3.1 Low
Cell Line Expression
Cell Line nTPM Notes
HUVEC (umbilical vein endothelial) 15.8 High expression
HMEC-1 (microvascular endothelial) 14.2 High expression
A549 (lung carcinoma) 2.5 Low expression
HeLa (cervical carcinoma) 1.8 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.2450G>A (p.Arg817Gln) Missense 0.01% Reduced phosphatase activity
c.3121C>T (p.Arg1041*) Nonsense <0.01% Loss of function
c.4000_4001del (p.Leu1334fs) Frameshift <0.01% Loss of function
Mutation functional classification

Loss of Function (LOF)

Missense, nonsense, and frameshift mutations that reduce or abolish phosphatase activity, impairing vascular development.

Gain of Function (GOF)

Not reported in PTPRB.

Dominant Negative (DN)

Not reported in PTPRB.

Pathways

Angiogenesis (Reactome: R-HSA-194315)
Signaling by Receptor Tyrosine Kinases (Reactome: R-HSA-9006934)
VEGF signaling pathway (KEGG: hsa04370)

Protein Summary

PTPRB is a 1998-amino acid transmembrane receptor protein tyrosine phosphatase. It contains an N-terminal signal peptide, a large extracellular domain with 17 fibronectin type III repeats, a single transmembrane domain, and two cytoplasmic phosphatase domains (D1 and D2). The D1 domain is catalytically active, while D2 is regulatory. PTPRB is highly expressed in endothelial cells and dephosphorylates TEK/Tie2, VE-cadherin, and other substrates to regulate vascular integrity and angiogenesis. Mutations in PTPRB are associated with hereditary hemorrhagic telangiectasia and vascular malformations.

Related Products

Product name Cat.No. Species Gene ID
PTPRB Knockout HEK293 Cell Line EDJ-KQ2240 Human 5787 Details Get a Quote
PTPRB Knockout HeLa Cell Line EDJ-KQ21227 Human 5787 Details Get a Quote
PTPRB Knockout A-549 Cell Line EDJ-KQ62762 Human 5787 Details Get a Quote
PTPRB Knockout HCT 116 Cell Line EDJ-KQ71231 Human 5787 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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