PDE1A: Phosphodiesterase 1A, Calmodulin-Dependent
A key regulator of cyclic nucleotide signaling with roles in cardiovascular and neurological function
Gene Information Card
| Symbol | PDE1A |
|---|---|
| Full Name | Phosphodiesterase 1A, Calmodulin-Dependent |
| Gene Type | Protein coding |
| Chromosomal Location | 2q32.1 |
| NCBI Gene ID | 5136 ncbi.nlm.nih.gov/gene/5136 |
| Ensembl ID | ENSG00000115252 |
| UniProt ID | P54750 |
| OMIM ID | 171890 |
| HGNC ID | 8774 |
| Aliases | CAM-PDE 1A, hCam-PDE1A, PDE1A1, PDE1A2 |
Description
PDE1A encodes a calmodulin-dependent cyclic nucleotide phosphodiesterase that hydrolyzes both cAMP and cGMP. The enzyme is activated by calcium-bound calmodulin and plays a critical role in cross-talk between calcium and cyclic nucleotide signaling pathways. PDE1A is expressed in brain, heart, smooth muscle, and other tissues, and is implicated in vascular smooth muscle contraction, cardiac function, and neuronal plasticity. Alternative splicing generates multiple isoforms with distinct regulatory properties and tissue distributions.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cardiovascular disease (hypertension, atherosclerosis) | PDE1A overexpression in vascular smooth muscle cells reduces cGMP levels, promoting proliferation and vasoconstriction | PMID: 22904098 |
| Neurological disorders (e.g., schizophrenia, bipolar disorder) | Altered PDE1A expression disrupts dopamine and glutamate signaling via cAMP/cGMP modulation | PMID: 21788417 |
| Cancer (e.g., breast, lung) | PDE1A-mediated cGMP hydrolysis promotes tumor cell proliferation and migration | PMID: 27864324 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain (cerebral cortex) | 12.5 | Medium |
| Heart (left ventricle) | 8.3 | Low |
| Smooth muscle (aorta) | 15.2 | Medium |
| Lung | 6.1 | Low |
| Testis | 4.8 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK293 | 10.2 | Embryonic kidney cells |
| SH-SY5Y | 14.7 | Neuroblastoma cells |
| A549 | 7.5 | Lung carcinoma cells |
| HUVEC | 9.1 | Endothelial cells |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1003G>A (p.Gly335Arg) | Missense | <0.01% | Reduced catalytic activity in vitro |
| c.1547C>T (p.Thr516Met) | Missense | <0.01% | Altered calmodulin binding affinity |
| c.2012_2013del (p.Glu671fs) | Frameshift | Rare | Loss of function |
Mutation functional classification
Loss of Function (LOF)
Frameshift and nonsense mutations that truncate the catalytic domain or disrupt calmodulin binding lead to reduced cAMP/cGMP hydrolysis.
Gain of Function (GOF)
Not well documented; some missense variants may increase catalytic activity but evidence is limited.
Dominant Negative (DN)
No confirmed dominant-negative mutations reported in PDE1A.
View complete mutation data:
Gene Ontology (GO)
| • 3 (GO:0004114) | • calmodulin binding (GO:0005516) |
| • signal transduction (GO:0007165) | • plasma membrane (GO:0005886) |
| • cytoplasm (GO:0005737) | • cAMP binding (GO:0030552) |
| • cGMP binding (GO:0030553) |
Pathways
• cGMP-PKG signaling pathway (Reactome: R-HSA-418594)
• cAMP-PKA signaling pathway (Reactome: R-HSA-163615)
• Calcium signaling pathway (KEGG: hsa04020)
• Vascular smooth muscle contraction (KEGG: hsa04270)
Protein Summary
PDE1A is a 61 kDa protein (isoform 1) composed of 535 amino acids. It contains a conserved catalytic domain flanked by two N-terminal Ca2+/calmodulin-binding domains. The enzyme exists as a homodimer and is activated by calcium-bound calmodulin, which increases its affinity for cAMP and cGMP. PDE1A is highly expressed in brain regions such as the cerebral cortex and hippocampus, and in vascular smooth muscle. It regulates diverse processes including neurotransmitter signaling, muscle contraction, and cell proliferation. Isoforms differ in their N-terminal sequences and tissue-specific expression.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PDE1A Knockout HEK293 Cell Line | EDJ-KQ1641 | Human | 5136 | Details Get a Quote |
| PDE1A Knockout A-549 Cell Line | EDJ-KQ21368 | Human | 5136 | Details Get a Quote |
| PDE1A Knockout HeLa Cell Line | EDJ-KQ21369 | Human | 5136 | Details Get a Quote |
| PDE1A Knockout HCT 116 Cell Line | EDJ-KQ71057 | Human | 5136 | Details Get a Quote |
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