PAPSS2: 3'-Phosphoadenosine 5'-Phosphosulfate Synthase 2
Key enzyme in sulfate activation and sulfation pathways
Gene Information Card
| Symbol | PAPSS2 |
|---|---|
| Full Name | 3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
| Gene Type | protein-coding |
| Chromosomal Location | 10q23.2 |
| NCBI Gene ID | 9060 ncbi.nlm.nih.gov/gene/9060 |
| Ensembl ID | ENSG00000198682 |
| UniProt ID | O95340 |
| OMIM ID | 603005 |
| HGNC ID | 8604 |
| Aliases | ATPSK2, SK2, PAPS synthase 2 |
Description
PAPSS2 encodes the bifunctional enzyme 3'-phosphoadenosine 5'-phosphosulfate synthase 2, which catalyzes the synthesis of 3'-phosphoadenosine 5'-phosphosulfate (PAPS), the universal sulfate donor for sulfation reactions. Sulfation is critical for the modification of proteoglycans, hormones, neurotransmitters, and xenobiotics. The enzyme has both ATP sulfurylase and APS kinase activities. Mutations in PAPSS2 cause autosomal recessive spondyloepimetaphyseal dysplasia (SEMD) Pakistani type and are associated with androgen excess and bone growth defects.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Spondyloepimetaphyseal dysplasia, Pakistani type | Loss-of-function mutations impair PAPS synthesis, disrupting proteoglycan sulfation in cartilage and bone | OMIM #612847; PMID: 18327256 |
| Androgen excess (adrenal) | Reduced DHEA sulfation leads to elevated free DHEA and androgen excess | PMID: 19366995 |
| Brachyolmia type 4 | Mutations in PAPSS2 cause a mild skeletal dysplasia with short stature | OMIM #612847; PMID: 18327256 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.5 | Medium |
| Adrenal gland | 10.2 | Medium |
| Cartilage | 8.1 | Medium |
| Kidney | 6.3 | Low |
| Small intestine | 5.7 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 14.3 | Hepatocellular carcinoma cell line |
| SW480 | 9.8 | Colorectal adenocarcinoma cell line |
| A549 | 7.2 | Lung carcinoma cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1000C>T (p.Arg334Trp) | Missense | Rare | Loss of function; associated with SEMD Pakistani type |
| c.1450G>A (p.Gly484Arg) | Missense | Rare | Loss of function; reduced enzyme activity |
| c.1669G>A (p.Gly557Arg) | Missense | Rare | Loss of function; impaired PAPS synthesis |
Mutation functional classification
Loss of Function (LOF)
Most reported mutations are loss-of-function, reducing or abolishing PAPS synthase activity, leading to impaired sulfation of proteoglycans and DHEA.
Gain of Function (GOF)
No gain-of-function mutations have been reported for PAPSS2.
Dominant Negative (DN)
No dominant-negative effects have been described; inheritance is autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
| • ATP sulfurylase activity (GO:0004078) | • APS kinase activity (GO:0004020) |
| • sulfate assimilation (GO:0000103) | • 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process (GO:0050428) |
| • sulfation (GO:0051923) |
Pathways
• Sulfate assimilation and activation (Reactome: R-HSA-174403)
• Sulfur metabolism (KEGG: hsa00920)
• Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate (KEGG: hsa00532)
Protein Summary
PAPSS2 is a bifunctional enzyme (56 kDa) that catalyzes two sequential reactions: first, ATP sulfurylase converts ATP and sulfate to adenosine 5'-phosphosulfate (APS) and pyrophosphate; second, APS kinase phosphorylates APS to form PAPS. The enzyme is localized in the cytoplasm and is highly expressed in liver, adrenal gland, and cartilage. PAPSS2 is the major isoform in tissues requiring high sulfation capacity, such as cartilage and adrenal cortex.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| PAPSS2 Knockout HEK293 Cell Line | EDJ-KQ2541 | Human | 9060 | Details Get a Quote |
| PAPSS2 Knockout A-549 Cell Line | EDJ-KQ23181 | Human | 9060 | Details Get a Quote |
| PAPSS2 Knockout HCT 116 Cell Line | EDJ-KQ23182 | Human | 9060 | Details Get a Quote |
| PAPSS2 Knockout HeLa Cell Line | EDJ-KQ23183 | Human | 9060 | Details Get a Quote |
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