NT5C1B-RDH14: A Readthrough Fusion Transcript with Potential Roles in Retinoid Metabolism and Nucleotide Homeostasis

A comprehensive biomedical overview of the NT5C1B-RDH14 gene, including genomic context, expression, and disease associations.

Gene Information Card

Symbol NT5C1B-RDH14
Full Name NT5C1B-RDH14 readthrough (NMD candidate)
Gene Type Readthrough transcript (protein coding)
Chromosomal Location 14q11.2 (GRCh38)
NCBI Gene ID 100874080 ncbi.nlm.nih.gov/gene/100874080
Ensembl ID ENSG00000259803
UniProt ID Not available (predicted)
OMIM ID Not available
HGNC ID HGNC:49334
Aliases NT5C1B-RDH14

Description

NT5C1B-RDH14 is a readthrough transcript that arises from the natural fusion of two adjacent genes on chromosome 14: NT5C1B (5'-nucleotidase, cytosolic IB) and RDH14 (retinol dehydrogenase 14). This locus produces a chimeric mRNA that is predicted to be a candidate for nonsense-mediated decay (NMD), suggesting that the fusion transcript may not yield a stable protein product. The individual genes encode proteins involved in nucleotide metabolism (NT5C1B) and retinol metabolism (RDH14), respectively. The readthrough transcript is expressed in various tissues, but its functional significance remains largely unexplored. This gene is listed in the HGNC database as a readthrough locus, and its existence is supported by transcript evidence in Ensembl and NCBI.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
No specific disease association Not established; readthrough transcript may be subject to NMD, limiting protein production. No direct evidence from ClinVar or OMIM.

Expression Profile

Tissue Expression
Tissue nTPM level
Testis Not available Low expression (based on GTEx data via Ensembl)
Kidney Not available Moderate expression
Liver Not available Low expression
Brain Not available Low expression
Cell Line Expression
Cell Line nTPM Notes
HeLa Not available No specific data; expression inferred from tissue data.
HEK293 Not available No specific data.
K562 Not available No specific data.
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
No curated variants Not applicable Not available No functional impact reported.
Mutation functional classification

Loss of Function (LOF)

Not applicable; no functional protein product is known.

Gain of Function (GOF)

Not applicable.

Dominant Negative (DN)

Not applicable.

Gene Ontology (GO)

• Molecular function: not annotated • Biological process: not annotated
• Cellular component: not annotated

Pathways

No specific pathways associated with the readthrough transcript. Individual genes may participate in nucleotide metabolism (NT5C1B) and retinol metabolism (RDH14).

Protein Summary

The NT5C1B-RDH14 readthrough transcript is predicted to encode a fusion protein that combines the N-terminal region of NT5C1B with the C-terminal region of RDH14. However, due to the presence of a premature stop codon, the transcript is a candidate for nonsense-mediated decay, and thus the protein may not be expressed in vivo. If expressed, the protein could potentially have altered enzymatic activities, but no experimental evidence is available.

Related Products

Product name Cat.No. Species Gene ID
NT5C1B-RDH14 Knockout HEK293 Cell Line EDJ-KQ52477 Human 100526794 Details Get a Quote
NT5C1B-RDH14 Knockout HeLa Cell Line EDJ-KQ60940 Human 100526794 Details Get a Quote
NT5C1B-RDH14 Knockout A-549 Cell Line EDJ-KQ69415 Human 100526794 Details Get a Quote
NT5C1B-RDH14 Knockout HCT 116 Cell Line EDJ-KQ77766 Human 100526794 Details Get a Quote
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