NSD2: Nuclear Receptor Binding SET Domain Protein 2

A histone methyltransferase implicated in multiple myeloma, Wolf-Hirschhorn syndrome, and other cancers

Gene Information Card

Symbol NSD2
Full Name Nuclear receptor binding SET domain protein 2
Gene Type Protein coding
Chromosomal Location 4p16.3
NCBI Gene ID 7468 ncbi.nlm.nih.gov/gene/7468
Ensembl ID ENSG00000109685
UniProt ID O96028
OMIM ID 602952
HGNC ID 12719
Aliases WHSC1, MMSET, TRX5, KMT3G, REIIBP

Description

NSD2 (Nuclear Receptor Binding SET Domain Protein 2), also known as WHSC1 or MMSET, encodes a histone methyltransferase that primarily catalyzes dimethylation of histone H3 at lysine 36 (H3K36me2). This modification is critical for chromatin regulation, transcriptional elongation, and DNA repair. The gene is located in the Wolf-Hirschhorn syndrome critical region on chromosome 4p16.3. NSD2 is recurrently overexpressed or mutated in multiple myeloma due to t(4;14) translocations, and loss-of-function mutations cause Wolf-Hirschhorn syndrome. It is also implicated in various solid tumors and developmental disorders.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Multiple myeloma t(4;14)(p16;q32) translocation leads to NSD2 overexpression, driving H3K36me2-mediated transcriptional reprogramming and proliferation COSMIC, ClinVar, PMID: 21804562
Wolf-Hirschhorn syndrome Haploinsufficiency or loss-of-function mutations in NSD2 cause developmental delay, intellectual disability, and characteristic facial features OMIM #194190, PMID: 15637732
Acute lymphoblastic leukemia NSD2 gain-of-function mutations (e.g., E1099K) increase H3K36me2 and promote leukemogenesis COSMIC, PMID: 28346433
Prostate cancer NSD2 overexpression correlates with poor prognosis and androgen receptor signaling PMID: 23563181
Breast cancer NSD2 amplification and overexpression linked to metastasis and tamoxifen resistance PMID: 27507835

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 15.2 Medium
Bone marrow 12.8 Medium
Lymph node 10.5 Medium
Brain 6.3 Low
Liver 4.1 Low
Heart 3.9 Low
Cell Line Expression
Cell Line nTPM Notes
K-562 (leukemia) 18.7 High expression
HeLa (cervical carcinoma) 14.2 Medium expression
HEK293 (embryonic kidney) 12.1 Medium expression
MCF7 (breast cancer) 9.8 Medium expression
HepG2 (liver cancer) 7.5 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
E1099K Missense ~5% in multiple myeloma Gain-of-function; increases H3K36me2 activity
T1150A Missense ~2% in ALL Gain-of-function; enhances methyltransferase activity
R1148W Missense Rare Loss-of-function; disrupts SET domain
Whole gene deletion Copy number loss Wolf-Hirschhorn syndrome Haploinsufficiency; developmental defects
t(4;14) fusion Translocation ~15% in multiple myeloma Overexpression of NSD2; oncogenic driver
Mutation functional classification

Loss of Function (LOF)

Deletions or missense mutations (e.g., R1148W) that reduce or abolish H3K36me2 activity, leading to Wolf-Hirschhorn syndrome phenotypes.

Gain of Function (GOF)

Missense mutations (e.g., E1099K, T1150A) that enhance methyltransferase activity, promoting oncogenesis in multiple myeloma and ALL.

Dominant Negative (DN)

Not well documented for NSD2; most reported mutations are either loss- or gain-of-function.

Pathways

Histone methylation (H3K36me2)
Chromatin remodeling
Transcriptional elongation by RNA polymerase II
DNA double-strand break repair via homologous recombination
Oncogenic signaling in multiple myeloma (t(4;14))

Protein Summary

NSD2 is a 1365-amino-acid nuclear protein containing a SET domain, PWWP domains, and PHD fingers. It functions as a histone methyltransferase that specifically dimethylates histone H3 at lysine 36 (H3K36me2), a mark associated with active transcription and chromatin accessibility. NSD2 interacts with nuclear receptors and transcription factors to regulate gene expression. Its overexpression due to t(4;14) translocation is a hallmark of a subset of multiple myeloma, while loss-of-function mutations cause Wolf-Hirschhorn syndrome. The protein also plays roles in DNA repair and development.

Related Products

Product name Cat.No. Species Gene ID
NSD2 Knockout HEK293 Cell Line EDJ-KQ3306 Human 7468 Details Get a Quote
NSD2 Knockout A-549 Cell Line EDJ-KQ24898 Human 7468 Details Get a Quote
NSD2 Knockout HCT 116 Cell Line EDJ-KQ24899 Human 7468 Details Get a Quote
NSD2 Knockout HeLa Cell Line EDJ-KQ24900 Human 7468 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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