NOTCH2 Gene
Notch Receptor 2: Key Regulator of Cell Fate and Development
Gene Information Card
| Symbol | NOTCH2 |
|---|---|
| Full Name | Notch Receptor 2 |
| Gene Type | protein-coding |
| Chromosomal Location | 1p12 |
| NCBI Gene ID | 4853 ncbi.nlm.nih.gov/gene/4853 |
| Ensembl ID | ENSG00000134250 |
| UniProt ID | Q04721 |
| OMIM ID | 600275 |
| HGNC ID | 7882 |
| Aliases | hN2, AGS2, HJCYS |
Description
NOTCH2 encodes a member of the Notch family of transmembrane receptors, which play a critical role in cell-fate determination, differentiation, and proliferation. The protein is a heterodimer composed of an extracellular domain and an intracellular domain, which upon ligand binding undergoes proteolytic cleavage to release the intracellular domain (NICD) that translocates to the nucleus and regulates transcription. NOTCH2 is essential for embryonic development, particularly in the cardiovascular, skeletal, and immune systems. Mutations in NOTCH2 are associated with Alagille syndrome type 2 and Hajdu-Cheney syndrome, and aberrant signaling is implicated in various cancers.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Alagille syndrome 2 | Loss-of-function mutations in NOTCH2 disrupt Notch signaling, leading to bile duct paucity, cardiac defects, and skeletal abnormalities. | OMIM #610205 |
| Hajdu-Cheney syndrome | Gain-of-function mutations in the PEST domain of NOTCH2 increase NICD stability, causing acro-osteolysis, osteoporosis, and craniofacial anomalies. | OMIM #102500 |
| B-cell chronic lymphocytic leukemia | NOTCH2 mutations (e.g., P2514Rfs*4) are recurrent and activate Notch signaling, promoting leukemogenesis. | COSMIC; PMID: 24681986 |
| Meningioma | NOTCH2 mutations (e.g., P2515Rfs*4) are found in a subset of meningiomas, contributing to tumorigenesis via aberrant Notch activation. | COSMIC; PMID: 28263317 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Heart | 12.5 | Medium |
| Lung | 8.3 | Low |
| Liver | 6.1 | Low |
| Kidney | 15.2 | Medium |
| Brain | 4.7 | Low |
| Spleen | 10.9 | Medium |
| Thymus | 18.4 | Medium |
| Bone marrow | 5.6 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HUVEC (umbilical vein endothelial) | 20.3 | High expression |
| K-562 (leukemia) | 12.1 | Medium expression |
| HeLa (cervical carcinoma) | 8.5 | Low expression |
| MCF7 (breast cancer) | 6.2 | Low expression |
| A549 (lung carcinoma) | 9.8 | Medium expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.6880C>T (p.Arg2294*) | Nonsense | <0.1% | Loss-of-function; associated with Alagille syndrome 2 |
| c.7562delC (p.Pro2521Leufs*4) | Frameshift | <0.1% | Gain-of-function; associated with Hajdu-Cheney syndrome |
| c.7541_7542delCT (p.Pro2514Argfs*4) | Frameshift | <0.1% | Gain-of-function; recurrent in B-CLL and meningioma |
| c.6892C>T (p.Arg2298Cys) | Missense | <0.1% | Loss-of-function; reported in Alagille syndrome |
Mutation functional classification
Loss of Function (LOF)
Truncating mutations (nonsense, frameshift) in the extracellular or transmembrane domain reduce receptor signaling, leading to Alagille syndrome 2.
Gain of Function (GOF)
Frameshift or nonsense mutations in the C-terminal PEST domain remove degradation motifs, stabilizing NICD and enhancing Notch signaling, causing Hajdu-Cheney syndrome and certain cancers.
Dominant Negative (DN)
Not well characterized for NOTCH2; most mutations act via haploinsufficiency or constitutive activation.
View complete mutation data:
Gene Ontology (GO)
| • Notch signaling pathway (GO:0007219) | • transcription regulator activity (GO:0140110) |
| • calcium ion binding (GO:0005509) | • cell differentiation (GO:0030154) |
| • cell fate determination (GO:0001709) | • negative regulation of transcription by RNA polymerase II (GO:0000122) |
Pathways
• Notch signaling pathway (KEGG hsa04330)
• Signaling by NOTCH2 (Reactome R-HSA-1980145)
• Pre-NOTCH processing in Golgi (Reactome R-HSA-1912408)
• NOTCH2 intracellular domain regulates transcription (Reactome R-HSA-2197563)
Protein Summary
NOTCH2 is a single-pass transmembrane receptor of 2471 amino acids (UniProt Q04721). It is synthesized as a precursor that is cleaved in the Golgi to form a heterodimer. The extracellular domain contains 36 EGF-like repeats and 3 LIN-12/Notch repeats, mediating ligand binding. The intracellular domain includes RAM domain, ankyrin repeats, and a C-terminal PEST domain. Upon ligand binding, sequential proteolytic cleavages by ADAM metalloproteases and gamma-secretase release NICD, which translocates to the nucleus and forms a transcriptional complex with RBPJ and MAML to activate target genes (e.g., HES, HEY).
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| NOTCH2 Knockout HEK293 Cell Line | EDJ-KQ436 | Human | 4853 | Details Get a Quote |
| NOTCH2NLA Knockout HEK293 Cell Line | EDJ-KQ14450 | Human | 388677 | Details Get a Quote |
| NOTCH2NLB Knockout HEK293 Cell Line | EDJ-KQ14451 | Human | 100996763 | Details Get a Quote |
| NOTCH2NLC Knockout HEK293 Cell Line | EDJ-KQ14452 | Human | 100996717 | Details Get a Quote |
| NOTCH2NLR Knockout HEK293 Cell Line | EDJ-KQ14453 | Human | 101929796 | Details Get a Quote |
| NOTCH2NLA Knockout A-549 Cell Line | EDJ-KQ44673 | Human | 388677 | Details Get a Quote |
| NOTCH2NLA Knockout HeLa Cell Line | EDJ-KQ44675 | Human | 388677 | Details Get a Quote |
| NOTCH2NLB Knockout A-549 Cell Line | EDJ-KQ44676 | Human | 100996763 | Details Get a Quote |
| NOTCH2NLB Knockout HCT 116 Cell Line | EDJ-KQ44677 | Human | 100996763 | Details Get a Quote |
| NOTCH2NLB Knockout HeLa Cell Line | EDJ-KQ44678 | Human | 100996763 | Details Get a Quote |
| NOTCH2NLC Knockout A-549 Cell Line | EDJ-KQ44679 | Human | 100996717 | Details Get a Quote |
| NOTCH2NLC Knockout HCT 116 Cell Line | EDJ-KQ44680 | Human | 100996717 | Details Get a Quote |
| NOTCH2NLC Knockout HeLa Cell Line | EDJ-KQ44681 | Human | 100996717 | Details Get a Quote |
| NOTCH2NLR Knockout HCT 116 Cell Line | EDJ-KQ44683 | Human | 101929796 | Details Get a Quote |
| NOTCH2NLR Knockout HeLa Cell Line | EDJ-KQ44684 | Human | 101929796 | Details Get a Quote |
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