NCF1: Neutrophil Cytosolic Factor 1
Key Component of the NADPH Oxidase Complex in Host Defense
Gene Information Card
| Symbol | NCF1 |
|---|---|
| Full Name | Neutrophil Cytosolic Factor 1 |
| Gene Type | Protein coding |
| Chromosomal Location | 7q11.23 |
| NCBI Gene ID | 653361 ncbi.nlm.nih.gov/gene/653361 |
| Ensembl ID | ENSG00000158517 |
| UniProt ID | P14598 |
| OMIM ID | 608512 |
| HGNC ID | 7660 |
| Aliases | p47phox, NOXO2, NCF1A, NCF1B, NCF1C |
Description
The NCF1 gene encodes neutrophil cytosolic factor 1, also known as p47phox, a 47 kDa cytosolic subunit of the NADPH oxidase complex. This enzyme complex is essential for the production of reactive oxygen species (ROS) in phagocytes, playing a critical role in host defense against microbial pathogens. NCF1 is primarily expressed in myeloid cells and is required for the assembly and activation of the NADPH oxidase upon phagocyte stimulation. Mutations in NCF1 are a major cause of autosomal recessive chronic granulomatous disease (CGD), characterized by recurrent bacterial and fungal infections.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Chronic granulomatous disease (CGD) | Loss-of-function mutations in NCF1 impair NADPH oxidase assembly, preventing ROS production and microbial killing in phagocytes. | ClinVar; OMIM #233700 |
| Granulomatous colitis | Defective ROS production due to NCF1 mutations leads to chronic inflammation and granuloma formation in the gastrointestinal tract. | NCBI Gene; OMIM |
| Systemic lupus erythematosus (SLE) | NCF1 polymorphisms may alter ROS levels, contributing to autoimmune dysregulation. | NCBI Gene; PubMed |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Whole blood | 12.5 | High |
| Spleen | 8.2 | Medium |
| Bone marrow | 7.9 | Medium |
| Lung | 3.1 | Low |
| Liver | 0.8 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HL-60 (promyeloblast) | 15.3 | High expression; inducible upon differentiation |
| THP-1 (monocyte) | 11.7 | High expression |
| K-562 (erythroleukemia) | 2.1 | Low expression |
| HeLa (cervical carcinoma) | 0.5 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.75_76delGT | Frameshift deletion | Common in CGD | Loss of function; premature truncation of p47phox |
| c.502G>A (p.Gly168Arg) | Missense | Rare | Impaired protein stability and NADPH oxidase activity |
| c.579G>A (p.Trp193Ter) | Nonsense | Rare | Loss of function; truncated protein |
Mutation functional classification
Loss of Function (LOF)
Most NCF1 mutations cause loss of function, leading to chronic granulomatous disease due to defective ROS production.
Gain of Function (GOF)
No gain-of-function mutations are reported in NCF1.
Dominant Negative (DN)
No dominant-negative mutations are documented for NCF1.
View complete mutation data:
Gene Ontology (GO)
| • protein binding (GO:0005515) | • superoxide-generating NADPH oxidase activity (GO:0016175) |
| • superoxide anion generation (GO:0042554) | • cytoplasm (GO:0005737) |
| • NADPH oxidase complex (GO:0043020) |
Pathways
• NADPH oxidase complex (Reactome: R-HSA-1222556)
• Innate immune system (Reactome: R-HSA-168249)
• Fcgamma receptor-mediated phagocytosis (KEGG: hsa04666)
Protein Summary
The NCF1 protein, p47phox, is a 390-amino acid cytosolic factor containing two SH3 domains, a PX domain, and a proline-rich region. It serves as an adaptor that translocates to the membrane upon cell activation, binding to membrane-bound cytochrome b558 (gp91phox and p22phox) to assemble the active NADPH oxidase. This complex catalyzes the reduction of oxygen to superoxide, a precursor to microbicidal ROS. Phosphorylation of p47phox by protein kinase C is a key regulatory step in oxidase activation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| Ncf1 Knockout MPC-5 Cell Line | EDJ-KQ75 | Mouse | 17969 | Details Get a Quote |
| NCF1 Knockout HEK293 Cell Line | EDJ-KQ11438 | Human | 653361 | Details Get a Quote |
| Ncf1 Knockout RAW 264.7 Cell Line | EDJ-KZ356 | Mouse | 17969 | Details Get a Quote |
| NCF1 Knockout HeLa Cell Line | EDJ-KQ60642 | Human | 653361 | Details Get a Quote |
| NCF1 Knockout A-549 Cell Line | EDJ-KQ69115 | Human | 653361 | Details Get a Quote |
| NCF1 Knockout HCT 116 Cell Line | EDJ-KQ77467 | Human | 653361 | Details Get a Quote |
Displaying Records 1 To 6 Of 6 Records