NAT2 Gene: N-Acetyltransferase 2
Pharmacogenomic marker for drug metabolism and toxicity susceptibility
Gene Information Card
| Symbol | NAT2 |
|---|---|
| Full Name | N-Acetyltransferase 2 |
| Gene Type | protein-coding |
| Chromosomal Location | 8p22 |
| NCBI Gene ID | 10 ncbi.nlm.nih.gov/gene/10 |
| Ensembl ID | ENSG00000156006 |
| UniProt ID | P11245 |
| OMIM ID | 612182 |
| HGNC ID | 7646 |
| Aliases | AAC2, NAT-2, PNAT |
Description
The NAT2 gene encodes N-acetyltransferase 2, a phase II drug-metabolizing enzyme that catalyzes the N-acetylation and O-acetylation of arylamine and hydrazine substrates. This enzyme is primarily expressed in the liver and gut, and its activity is highly polymorphic, leading to distinct acetylator phenotypes (slow, intermediate, rapid) that influence drug response and toxicity. NAT2 is involved in the metabolism of numerous drugs, including isoniazid, sulfamethoxazole, procainamide, and dapsone, as well as carcinogenic arylamines found in tobacco smoke and diet.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Drug-induced liver injury (isoniazid) | Slow acetylator phenotype leads to accumulation of toxic metabolites | ClinVar, PMID: 12164743 |
| Bladder cancer | Rapid acetylator phenotype may increase activation of carcinogenic arylamines | OMIM, PMID: 10972340 |
| Sulfonamide hypersensitivity | Slow acetylator phenotype increases risk of adverse reactions | ClinVar, PMID: 10632656 |
| Colorectal cancer | Polymorphisms modulate risk through dietary heterocyclic amine metabolism | PMID: 15642702 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 32.5 | High |
| Small intestine | 18.2 | Medium |
| Colon | 10.1 | Medium |
| Kidney | 5.3 | Low |
| Lung | 2.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 15.4 | Hepatocellular carcinoma cell line |
| Caco-2 | 8.7 | Colorectal adenocarcinoma cell line |
| A549 | 1.2 | Lung carcinoma cell line |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| NAT2*5 (rs1801280, Ile114Thr) | SNP | ~45% in Europeans | Reduced enzyme activity (slow acetylator) |
| NAT2*6 (rs1799930, Arg197Gln) | SNP | ~28% in Europeans | Reduced enzyme activity (slow acetylator) |
| NAT2*7 (rs1799931, Gly286Glu) | SNP | ~2% in Europeans | Reduced enzyme activity (slow acetylator) |
| NAT2*4 (wild-type) | Reference | ~25% in Europeans | Normal enzyme activity (rapid acetylator) |
Mutation functional classification
Loss of Function (LOF)
NAT2*5, *6, *7 alleles cause reduced or absent enzyme activity, leading to slow acetylator phenotype.
Gain of Function (GOF)
No well-characterized gain-of-function variants; rapid acetylator phenotype is due to wild-type or high-activity alleles.
Dominant Negative (DN)
Not reported for NAT2; phenotype is codominant based on allele dosage.
View complete mutation data:
Gene Ontology (GO)
| • arylamine N-acetyltransferase activity (GO:0004060) | • xenobiotic metabolic process (GO:0006805) |
| • transferase activity (GO:0016740) | • cytoplasm (GO:0005737) |
Pathways
• Drug metabolism – other enzymes (KEGG: hsa00983)
• Metabolism of xenobiotics by cytochrome P450 (KEGG: hsa00980)
• Phase II conjugation (Reactome: R-HSA-156588)
Protein Summary
N-acetyltransferase 2 (NAT2) is a 290-amino acid cytosolic enzyme that transfers an acetyl group from acetyl-CoA to arylamine and hydrazine substrates. The protein is highly polymorphic, with over 50 known alleles. The most common slow acetylator variants (NAT2*5, *6, *7) result in decreased protein stability or catalytic activity. NAT2 plays a critical role in the detoxification and activation of drugs and carcinogens, making it a key pharmacogenomic marker.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| NAT2 Knockout HEK293 Cell Line | EDJ-KQ2435 | Human | 10 | Details Get a Quote |
| GNAT2 Knockout HEK293 Cell Line | EDJ-KQ4740 | Human | 2780 | Details Get a Quote |
| NMNAT2 Knockout HEK293 Cell Line | EDJ-KQ7802 | Human | 23057 | Details Get a Quote |
| NMNAT2 Knockout HeLa Cell Line | EDJ-KQ33315 | Human | 23057 | Details Get a Quote |
| NAT2 Knockout HeLa Cell Line | EDJ-KQ52528 | Human | 10 | Details Get a Quote |
| GNAT2 Knockout HeLa Cell Line | EDJ-KQ53367 | Human | 2780 | Details Get a Quote |
| NAT2 Knockout A-549 Cell Line | EDJ-KQ61011 | Human | 10 | Details Get a Quote |
| GNAT2 Knockout A-549 Cell Line | EDJ-KQ61844 | Human | 2780 | Details Get a Quote |
| NMNAT2 Knockout A-549 Cell Line | EDJ-KQ64179 | Human | 23057 | Details Get a Quote |
| NAT2 Knockout HCT 116 Cell Line | EDJ-KQ69484 | Human | 10 | Details Get a Quote |
| GNAT2 Knockout HCT 116 Cell Line | EDJ-KQ70329 | Human | 2780 | Details Get a Quote |
| NMNAT2 Knockout HCT 116 Cell Line | EDJ-KQ72621 | Human | 23057 | Details Get a Quote |
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