NAT2 Gene: N-Acetyltransferase 2

Pharmacogenomic marker for drug metabolism and toxicity susceptibility

Gene Information Card

Symbol NAT2
Full Name N-Acetyltransferase 2
Gene Type protein-coding
Chromosomal Location 8p22
NCBI Gene ID 10 ncbi.nlm.nih.gov/gene/10
Ensembl ID ENSG00000156006
UniProt ID P11245
OMIM ID 612182
HGNC ID 7646
Aliases AAC2, NAT-2, PNAT

Description

The NAT2 gene encodes N-acetyltransferase 2, a phase II drug-metabolizing enzyme that catalyzes the N-acetylation and O-acetylation of arylamine and hydrazine substrates. This enzyme is primarily expressed in the liver and gut, and its activity is highly polymorphic, leading to distinct acetylator phenotypes (slow, intermediate, rapid) that influence drug response and toxicity. NAT2 is involved in the metabolism of numerous drugs, including isoniazid, sulfamethoxazole, procainamide, and dapsone, as well as carcinogenic arylamines found in tobacco smoke and diet.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Drug-induced liver injury (isoniazid) Slow acetylator phenotype leads to accumulation of toxic metabolites ClinVar, PMID: 12164743
Bladder cancer Rapid acetylator phenotype may increase activation of carcinogenic arylamines OMIM, PMID: 10972340
Sulfonamide hypersensitivity Slow acetylator phenotype increases risk of adverse reactions ClinVar, PMID: 10632656
Colorectal cancer Polymorphisms modulate risk through dietary heterocyclic amine metabolism PMID: 15642702

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 32.5 High
Small intestine 18.2 Medium
Colon 10.1 Medium
Kidney 5.3 Low
Lung 2.1 Low
Cell Line Expression
Cell Line nTPM Notes
HepG2 15.4 Hepatocellular carcinoma cell line
Caco-2 8.7 Colorectal adenocarcinoma cell line
A549 1.2 Lung carcinoma cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
NAT2*5 (rs1801280, Ile114Thr) SNP ~45% in Europeans Reduced enzyme activity (slow acetylator)
NAT2*6 (rs1799930, Arg197Gln) SNP ~28% in Europeans Reduced enzyme activity (slow acetylator)
NAT2*7 (rs1799931, Gly286Glu) SNP ~2% in Europeans Reduced enzyme activity (slow acetylator)
NAT2*4 (wild-type) Reference ~25% in Europeans Normal enzyme activity (rapid acetylator)
Mutation functional classification

Loss of Function (LOF)

NAT2*5, *6, *7 alleles cause reduced or absent enzyme activity, leading to slow acetylator phenotype.

Gain of Function (GOF)

No well-characterized gain-of-function variants; rapid acetylator phenotype is due to wild-type or high-activity alleles.

Dominant Negative (DN)

Not reported for NAT2; phenotype is codominant based on allele dosage.

Pathways

Drug metabolism – other enzymes (KEGG: hsa00983)
Metabolism of xenobiotics by cytochrome P450 (KEGG: hsa00980)
Phase II conjugation (Reactome: R-HSA-156588)

Protein Summary

N-acetyltransferase 2 (NAT2) is a 290-amino acid cytosolic enzyme that transfers an acetyl group from acetyl-CoA to arylamine and hydrazine substrates. The protein is highly polymorphic, with over 50 known alleles. The most common slow acetylator variants (NAT2*5, *6, *7) result in decreased protein stability or catalytic activity. NAT2 plays a critical role in the detoxification and activation of drugs and carcinogens, making it a key pharmacogenomic marker.

Related Products

Product name Cat.No. Species Gene ID
NAT2 Knockout HEK293 Cell Line EDJ-KQ2435 Human 10 Details Get a Quote
GNAT2 Knockout HEK293 Cell Line EDJ-KQ4740 Human 2780 Details Get a Quote
NMNAT2 Knockout HEK293 Cell Line EDJ-KQ7802 Human 23057 Details Get a Quote
NMNAT2 Knockout HeLa Cell Line EDJ-KQ33315 Human 23057 Details Get a Quote
NAT2 Knockout HeLa Cell Line EDJ-KQ52528 Human 10 Details Get a Quote
GNAT2 Knockout HeLa Cell Line EDJ-KQ53367 Human 2780 Details Get a Quote
NAT2 Knockout A-549 Cell Line EDJ-KQ61011 Human 10 Details Get a Quote
GNAT2 Knockout A-549 Cell Line EDJ-KQ61844 Human 2780 Details Get a Quote
NMNAT2 Knockout A-549 Cell Line EDJ-KQ64179 Human 23057 Details Get a Quote
NAT2 Knockout HCT 116 Cell Line EDJ-KQ69484 Human 10 Details Get a Quote
GNAT2 Knockout HCT 116 Cell Line EDJ-KQ70329 Human 2780 Details Get a Quote
NMNAT2 Knockout HCT 116 Cell Line EDJ-KQ72621 Human 23057 Details Get a Quote
Displaying Records 1 To 12 Of 12 Records
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