NAGS Gene - N-Acetylglutamate Synthase

Genetic and Functional Insights into NAGS, a Key Enzyme in the Urea Cycle

Gene Information Card

Symbol NAGS
Full Name N-acetylglutamate synthase
Gene Type protein-coding
Chromosomal Location 17q21.31
NCBI Gene ID 162417 ncbi.nlm.nih.gov/gene/162417
Ensembl ID ENSG00000161653
UniProt ID Q8N159
OMIM ID 608300
HGNC ID 17996
Aliases NAG synthase, NAGS1, ARG7

Description

The NAGS gene encodes N-acetylglutamate synthase (NAGS), a mitochondrial enzyme that catalyzes the formation of N-acetylglutamate (NAG) from glutamate and acetyl-CoA. NAG is an essential allosteric activator of carbamoyl phosphate synthetase I (CPS1), the first and rate-limiting enzyme of the urea cycle. NAGS deficiency leads to hyperammonemia and is inherited in an autosomal recessive pattern.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
N-acetylglutamate synthase deficiency Loss-of-function mutations in NAGS reduce or abolish NAG production, impairing CPS1 activation and urea cycle function, leading to ammonia accumulation. OMIM #237310; multiple case reports and functional studies
Hyperammonemia, type I Deficient NAGS activity results in inadequate activation of CPS1, causing elevated blood ammonia levels, particularly in neonates. ClinVar; literature review

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 12.5 High
Small intestine 3.2 Low
Kidney 2.1 Low
Brain 0.8 Not detected
Heart 0.5 Not detected
Cell Line Expression
Cell Line nTPM Notes
HepG2 15.3 Liver carcinoma cell line; high expression
HEK293 0.2 Embryonic kidney; very low expression
HeLa 0.1 Cervical carcinoma; not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.500G>A (p.Arg167Gln) Missense Unknown Reduced enzyme activity; associated with NAGS deficiency
c.971delC (p.Pro324Leufs*2) Frameshift Unknown Loss of function; truncation of protein
c.1A>G (p.Met1?) Start loss Unknown No protein synthesis; severe deficiency
Mutation functional classification

Loss of Function (LOF)

Most reported NAGS mutations are loss-of-function, leading to reduced or absent NAG synthesis and impaired urea cycle.

Gain of Function (GOF)

No gain-of-function mutations have been reported for NAGS.

Dominant Negative (DN)

No dominant-negative effects have been described; NAGS deficiency is recessive.

Gene Ontology (GO)

• acetylglutamate kinase activity (GO:0003991) • N-acetylglutamate synthase activity (GO:0004042)
mitochondrion (GO:0005739) urea cycle (GO:0006595)
urea cycle intermediate metabolism (GO:0000050)

Pathways

Urea cycle and metabolism of arginine
proline
glutamate
aspartate and asparagine (KEGG: map00220)
Metabolism of amino acids and derivatives (Reactome: R-HSA-71291)

Protein Summary

N-acetylglutamate synthase (NAGS) is a mitochondrial enzyme composed of 534 amino acids. It catalyzes the formation of N-acetylglutamate (NAG), an essential allosteric activator of carbamoyl phosphate synthetase I (CPS1). The enzyme is primarily expressed in the liver and small intestine. Mutations in NAGS cause NAGS deficiency, a rare autosomal recessive disorder characterized by hyperammonemia, lethargy, and coma. Treatment includes N-carbamylglutamate, a synthetic analog of NAG.

Related Products

Product name Cat.No. Species Gene ID
NAGS Knockout HEK293 Cell Line EDJ-KQ14366 Human 162417 Details Get a Quote
NAGS Knockout HCT 116 Cell Line EDJ-KQ44503 Human 162417 Details Get a Quote
NAGS Knockout HeLa Cell Line EDJ-KQ44504 Human 162417 Details Get a Quote
NAGS Knockout A-549 Cell Line EDJ-KQ67324 Human 162417 Details Get a Quote
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