NAGS Gene - N-Acetylglutamate Synthase
Genetic and Functional Insights into NAGS, a Key Enzyme in the Urea Cycle
Gene Information Card
| Symbol | NAGS |
|---|---|
| Full Name | N-acetylglutamate synthase |
| Gene Type | protein-coding |
| Chromosomal Location | 17q21.31 |
| NCBI Gene ID | 162417 ncbi.nlm.nih.gov/gene/162417 |
| Ensembl ID | ENSG00000161653 |
| UniProt ID | Q8N159 |
| OMIM ID | 608300 |
| HGNC ID | 17996 |
| Aliases | NAG synthase, NAGS1, ARG7 |
Description
The NAGS gene encodes N-acetylglutamate synthase (NAGS), a mitochondrial enzyme that catalyzes the formation of N-acetylglutamate (NAG) from glutamate and acetyl-CoA. NAG is an essential allosteric activator of carbamoyl phosphate synthetase I (CPS1), the first and rate-limiting enzyme of the urea cycle. NAGS deficiency leads to hyperammonemia and is inherited in an autosomal recessive pattern.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| N-acetylglutamate synthase deficiency | Loss-of-function mutations in NAGS reduce or abolish NAG production, impairing CPS1 activation and urea cycle function, leading to ammonia accumulation. | OMIM #237310; multiple case reports and functional studies |
| Hyperammonemia, type I | Deficient NAGS activity results in inadequate activation of CPS1, causing elevated blood ammonia levels, particularly in neonates. | ClinVar; literature review |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.5 | High |
| Small intestine | 3.2 | Low |
| Kidney | 2.1 | Low |
| Brain | 0.8 | Not detected |
| Heart | 0.5 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 15.3 | Liver carcinoma cell line; high expression |
| HEK293 | 0.2 | Embryonic kidney; very low expression |
| HeLa | 0.1 | Cervical carcinoma; not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.500G>A (p.Arg167Gln) | Missense | Unknown | Reduced enzyme activity; associated with NAGS deficiency |
| c.971delC (p.Pro324Leufs*2) | Frameshift | Unknown | Loss of function; truncation of protein |
| c.1A>G (p.Met1?) | Start loss | Unknown | No protein synthesis; severe deficiency |
Mutation functional classification
Loss of Function (LOF)
Most reported NAGS mutations are loss-of-function, leading to reduced or absent NAG synthesis and impaired urea cycle.
Gain of Function (GOF)
No gain-of-function mutations have been reported for NAGS.
Dominant Negative (DN)
No dominant-negative effects have been described; NAGS deficiency is recessive.
View complete mutation data:
Gene Ontology (GO)
| • acetylglutamate kinase activity (GO:0003991) | • N-acetylglutamate synthase activity (GO:0004042) |
| • mitochondrion (GO:0005739) | • urea cycle (GO:0006595) |
| • urea cycle intermediate metabolism (GO:0000050) |
Pathways
• Urea cycle and metabolism of arginine
• proline
• glutamate
• aspartate and asparagine (KEGG: map00220)
• Metabolism of amino acids and derivatives (Reactome: R-HSA-71291)
Protein Summary
N-acetylglutamate synthase (NAGS) is a mitochondrial enzyme composed of 534 amino acids. It catalyzes the formation of N-acetylglutamate (NAG), an essential allosteric activator of carbamoyl phosphate synthetase I (CPS1). The enzyme is primarily expressed in the liver and small intestine. Mutations in NAGS cause NAGS deficiency, a rare autosomal recessive disorder characterized by hyperammonemia, lethargy, and coma. Treatment includes N-carbamylglutamate, a synthetic analog of NAG.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| NAGS Knockout HEK293 Cell Line | EDJ-KQ14366 | Human | 162417 | Details Get a Quote |
| NAGS Knockout HCT 116 Cell Line | EDJ-KQ44503 | Human | 162417 | Details Get a Quote |
| NAGS Knockout HeLa Cell Line | EDJ-KQ44504 | Human | 162417 | Details Get a Quote |
| NAGS Knockout A-549 Cell Line | EDJ-KQ67324 | Human | 162417 | Details Get a Quote |
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