MTOR Gene: Structure, Function, and Clinical Significance
A comprehensive overview of the MTOR gene, its protein product, associated diseases, and expression patterns.
Gene Information Card
| Symbol | MTOR |
|---|---|
| Full Name | mechanistic target of rapamycin kinase |
| Gene Type | protein coding |
| Chromosomal Location | 1p36.22 |
| NCBI Gene ID | 2475 ncbi.nlm.nih.gov/gene/2475 |
| Ensembl ID | ENSG00000198793 |
| UniProt ID | P42345 |
| OMIM ID | 601231 |
| HGNC ID | 3942 |
| Aliases | FRAP, FRAP1, FRAP2, RAFT1, RAPT1 |
Description
The MTOR gene encodes the mechanistic target of rapamycin (mTOR), a serine/threonine kinase that serves as a central regulator of cell growth, proliferation, motility, survival, and protein synthesis. It integrates signals from growth factors, nutrients, and cellular energy status to modulate cellular metabolism. mTOR is a key component of two distinct complexes, mTORC1 and mTORC2, which have different substrates and functions. Dysregulation of MTOR is implicated in various cancers, metabolic disorders, and developmental syndromes.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Cancer (multiple types) | Activating mutations or amplification of MTOR lead to constitutive activation of mTORC1, promoting uncontrolled cell growth and proliferation. | COSMIC; ClinVar |
| Smith-Kingsmore syndrome | Germline gain-of-function mutations in MTOR cause macrocephaly, intellectual disability, and distinctive facial features. | OMIM; ClinVar |
| Focal cortical dysplasia (type II) | Somatic MTOR mutations in brain tissue cause abnormal neuronal migration and cortical malformations, leading to epilepsy. | ClinVar; literature |
| Leiomyosarcoma | MTOR mutations or pathway activation contribute to tumor progression and resistance to apoptosis. | COSMIC |
| Perivascular epithelioid cell tumors (PEComas) | Loss-of-function mutations in TSC1/TSC2 or activating MTOR mutations lead to mTORC1 hyperactivation, driving tumor growth. | ClinVar; literature |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.4 | High |
| Muscle | 8.2 | Medium |
| Liver | 7.5 | Medium |
| Kidney | 6.9 | Medium |
| Lung | 5.8 | Low |
| Heart | 5.5 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HeLa | 15.3 | High expression; commonly used in mTOR studies |
| A549 | 10.1 | Moderate expression; lung carcinoma |
| MCF7 | 9.8 | Moderate expression; breast cancer |
| HepG2 | 8.4 | Moderate expression; liver cancer |
| K562 | 6.2 | Low expression; leukemia |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| p.M2327I | Missense | 0.5% | Gain-of-function; increases kinase activity |
| p.S2215Y | Missense | 0.3% | Gain-of-function; associated with focal cortical dysplasia |
| p.E2419K | Missense | 0.2% | Gain-of-function; found in cancer |
| p.R2505P | Missense | 0.1% | Gain-of-function; linked to Smith-Kingsmore syndrome |
| p.L1460P | Missense | 0.1% | Loss-of-function; reduces kinase activity |
Mutation functional classification
Loss of Function (LOF)
Loss-of-function mutations in MTOR are rare and typically result in reduced kinase activity, leading to impaired cell growth and proliferation. These may be associated with developmental defects.
Gain of Function (GOF)
Gain-of-function mutations are more common and lead to hyperactivation of mTORC1, promoting tumorigenesis, abnormal cell growth, and cortical malformations.
Dominant Negative (DN)
Dominant-negative mutations have not been well-characterized for MTOR; most mutations are either activating or inactivating.
View complete mutation data:
Gene Ontology (GO)
| • protein kinase activity | • ATP binding |
| • signal transduction | • regulation of cell growth |
| • response to nutrient levels | • TORC1 complex |
| • TORC2 complex |
Pathways
• PI3K/AKT/mTOR pathway
• mTOR signaling pathway
• Insulin signaling pathway
• Autophagy regulation
• Cell cycle regulation
Protein Summary
The mTOR protein is a large (289 kDa) serine/threonine kinase that forms two distinct complexes: mTORC1 (with Raptor, mLST8, and PRAS40) and mTORC2 (with Rictor, mLST8, and SIN1). mTORC1 is rapamycin-sensitive and regulates protein synthesis, autophagy, and lipid biogenesis in response to growth factors and amino acids. mTORC2 is rapamycin-insensitive and controls cell survival and cytoskeletal organization by phosphorylating AKT and other targets. The protein contains multiple domains including HEAT repeats, FAT domain, FRB domain, kinase domain, and FATC domain. Its activity is tightly regulated by upstream signals such as PI3K/AKT, AMPK, and amino acid sensing via Rag GTPases.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| LAMTOR1 Knockout HEK293 Cell Line | EDJ-KQ1147 | Human | 55004 | Details Get a Quote |
| LAMTOR4 Knockout HEK293 Cell Line | EDJ-KQ1148 | Human | 389541 | Details Get a Quote |
| LAMTOR5 Knockout HEK293 Cell Line | EDJ-KQ1149 | Human | 10542 | Details Get a Quote |
| LAMTOR5 Knockout A-549 Cell Line | EDJ-KQ19031 | Human | 10542 | Details Get a Quote |
| LAMTOR1 Knockout A-549 Cell Line | EDJ-KQ20369 | Human | 55004 | Details Get a Quote |
| LAMTOR1 Knockout HCT 116 Cell Line | EDJ-KQ20370 | Human | 55004 | Details Get a Quote |
| LAMTOR1 Knockout HeLa Cell Line | EDJ-KQ20371 | Human | 55004 | Details Get a Quote |
| LAMTOR4 Knockout HCT 116 Cell Line | EDJ-KQ20372 | Human | 389541 | Details Get a Quote |
| LAMTOR4 Knockout HeLa Cell Line | EDJ-KQ20373 | Human | 389541 | Details Get a Quote |
| LAMTOR5 Knockout HCT 116 Cell Line | EDJ-KQ20375 | Human | 10542 | Details Get a Quote |
| LAMTOR5 Knockout HeLa Cell Line | EDJ-KQ20376 | Human | 10542 | Details Get a Quote |
| SAMTOR Knockout A-549 Cell Line | EDJ-KQ41557 | Human | 154743 | Details Get a Quote |
| SAMTOR Knockout HCT 116 Cell Line | EDJ-KQ41558 | Human | 154743 | Details Get a Quote |
| SAMTOR Knockout HeLa Cell Line | EDJ-KQ41559 | Human | 154743 | Details Get a Quote |
| Lamtor5 Knockout 4T1 Cell Line | EDJ-KZ322 | Mouse | 68576 | Details Get a Quote |
Displaying Records 1 To 15 Of 26 Records