MORC1: A Key Regulator of Meiotic Chromatin Remodeling and Spermatogenesis

Comprehensive genomic and functional analysis of the MORC1 gene, its role in male infertility, and implications for epigenetic regulation.

Gene Information Card

Symbol MORC1
Full Name MORC family CW-type zinc finger 1
Gene Type Protein-coding
Chromosomal Location 3q13.13
NCBI Gene ID 27136 ncbi.nlm.nih.gov/gene/27136
Ensembl ID ENSG00000114487
UniProt ID Q86V20
OMIM ID 619994
HGNC ID 23476
Aliases MORC, ZCW5, AT-hook-containing transcription factor

Description

MORC1 (MORC family CW-type zinc finger 1) is a protein-coding gene located on chromosome 3q13.13. It encodes a nuclear protein containing a CW-type zinc finger domain and an ATPase domain, which is involved in chromatin remodeling and transcriptional repression. MORC1 plays a critical role in meiotic progression and spermatogenesis, particularly in the silencing of unsynapsed chromatin during male meiosis. It is essential for male fertility, as loss-of-function mutations lead to meiotic arrest and azoospermia. The protein also participates in epigenetic regulation through interaction with histone modifiers and DNA methylation pathways.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Spermatogenic failure 65 (SPGF65) Loss-of-function mutations in MORC1 disrupt meiotic chromatin remodeling, leading to meiotic arrest and impaired spermatogenesis. OMIM #619994; ClinVar; multiple case studies
Male infertility with azoospermia MORC1 deficiency causes failure of meiotic sex chromosome inactivation (MSCI) and subsequent germ cell apoptosis. OMIM; PubMed; ClinVar
Non-obstructive azoospermia Biallelic pathogenic variants in MORC1 are associated with non-obstructive azoospermia due to meiotic arrest. ClinVar; literature

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 45.2 High
Ovary 2.1 Low
Brain (cerebellum) 1.5 Low
Heart 0.8 Not detected
Liver 0.3 Not detected
Cell Line Expression
Cell Line nTPM Notes
Seminiferous tubule cells (testis) 45.2 High expression in spermatocytes and spermatids
HEK293 0.5 Low/not detected
HeLa 0.2 Not detected
K562 0.1 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412*) Nonsense Rare Loss of function; truncation of ATPase domain; associated with azoospermia
c.567_568del (p.Glu190fs) Frameshift Rare Loss of function; premature stop; meiotic arrest
c.890A>G (p.Tyr297Cys) Missense Rare Likely damaging; disrupts CW zinc finger domain; reduced chromatin binding
c.1456G>A (p.Gly486Arg) Missense Rare Uncertain significance; may affect ATPase activity
Mutation functional classification

Loss of Function (LOF)

Nonsense, frameshift, and splice-site mutations that truncate or abolish MORC1 protein function lead to meiotic arrest and male infertility (SPGF65).

Gain of Function (GOF)

No gain-of-function mutations have been reported for MORC1.

Dominant Negative (DN)

No dominant-negative mutations have been described; all reported pathogenic variants are recessive.

Pathways

Meiotic recombination (Reactome: R-HSA-912446)
Chromatin modifying enzymes (Reactome: R-HSA-3247509)
Epigenetic regulation of gene expression (KEGG: hsa05202)

Protein Summary

The MORC1 protein (UniProt Q86V20) is a 1,032-amino acid nuclear protein that belongs to the MORC family. It contains an N-terminal CW-type zinc finger domain that mediates interaction with methylated histones (H3K4me3), a central ATPase domain (GHKL-type) essential for chromatin remodeling, and a C-terminal coiled-coil region involved in homodimerization. MORC1 functions as a transcriptional repressor by promoting heterochromatin formation and silencing unsynapsed chromatin during male meiosis. It is highly expressed in testicular germ cells, particularly in pachytene spermatocytes. Loss of MORC1 leads to defective meiotic sex chromosome inactivation (MSCI), meiotic arrest, and apoptosis of spermatocytes, resulting in non-obstructive azoospermia and male infertility.

Related Products

Product name Cat.No. Species Gene ID
MORC1 Knockout HEK293 Cell Line EDJ-KQ8692 Human 27136 Details Get a Quote
MORC1 Knockout HeLa Cell Line EDJ-KQ56011 Human 27136 Details Get a Quote
MORC1 Knockout A-549 Cell Line EDJ-KQ64499 Human 27136 Details Get a Quote
MORC1 Knockout HCT 116 Cell Line EDJ-KQ72956 Human 27136 Details Get a Quote
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