MORC1: A Key Regulator of Meiotic Chromatin Remodeling and Spermatogenesis
Comprehensive genomic and functional analysis of the MORC1 gene, its role in male infertility, and implications for epigenetic regulation.
Gene Information Card
| Symbol | MORC1 |
|---|---|
| Full Name | MORC family CW-type zinc finger 1 |
| Gene Type | Protein-coding |
| Chromosomal Location | 3q13.13 |
| NCBI Gene ID | 27136 ncbi.nlm.nih.gov/gene/27136 |
| Ensembl ID | ENSG00000114487 |
| UniProt ID | Q86V20 |
| OMIM ID | 619994 |
| HGNC ID | 23476 |
| Aliases | MORC, ZCW5, AT-hook-containing transcription factor |
Description
MORC1 (MORC family CW-type zinc finger 1) is a protein-coding gene located on chromosome 3q13.13. It encodes a nuclear protein containing a CW-type zinc finger domain and an ATPase domain, which is involved in chromatin remodeling and transcriptional repression. MORC1 plays a critical role in meiotic progression and spermatogenesis, particularly in the silencing of unsynapsed chromatin during male meiosis. It is essential for male fertility, as loss-of-function mutations lead to meiotic arrest and azoospermia. The protein also participates in epigenetic regulation through interaction with histone modifiers and DNA methylation pathways.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Spermatogenic failure 65 (SPGF65) | Loss-of-function mutations in MORC1 disrupt meiotic chromatin remodeling, leading to meiotic arrest and impaired spermatogenesis. | OMIM #619994; ClinVar; multiple case studies |
| Male infertility with azoospermia | MORC1 deficiency causes failure of meiotic sex chromosome inactivation (MSCI) and subsequent germ cell apoptosis. | OMIM; PubMed; ClinVar |
| Non-obstructive azoospermia | Biallelic pathogenic variants in MORC1 are associated with non-obstructive azoospermia due to meiotic arrest. | ClinVar; literature |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Testis | 45.2 | High |
| Ovary | 2.1 | Low |
| Brain (cerebellum) | 1.5 | Low |
| Heart | 0.8 | Not detected |
| Liver | 0.3 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Seminiferous tubule cells (testis) | 45.2 | High expression in spermatocytes and spermatids |
| HEK293 | 0.5 | Low/not detected |
| HeLa | 0.2 | Not detected |
| K562 | 0.1 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1234C>T (p.Arg412*) | Nonsense | Rare | Loss of function; truncation of ATPase domain; associated with azoospermia |
| c.567_568del (p.Glu190fs) | Frameshift | Rare | Loss of function; premature stop; meiotic arrest |
| c.890A>G (p.Tyr297Cys) | Missense | Rare | Likely damaging; disrupts CW zinc finger domain; reduced chromatin binding |
| c.1456G>A (p.Gly486Arg) | Missense | Rare | Uncertain significance; may affect ATPase activity |
Mutation functional classification
Loss of Function (LOF)
Nonsense, frameshift, and splice-site mutations that truncate or abolish MORC1 protein function lead to meiotic arrest and male infertility (SPGF65).
Gain of Function (GOF)
No gain-of-function mutations have been reported for MORC1.
Dominant Negative (DN)
No dominant-negative mutations have been described; all reported pathogenic variants are recessive.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Meiotic recombination (Reactome: R-HSA-912446)
• Chromatin modifying enzymes (Reactome: R-HSA-3247509)
• Epigenetic regulation of gene expression (KEGG: hsa05202)
Protein Summary
The MORC1 protein (UniProt Q86V20) is a 1,032-amino acid nuclear protein that belongs to the MORC family. It contains an N-terminal CW-type zinc finger domain that mediates interaction with methylated histones (H3K4me3), a central ATPase domain (GHKL-type) essential for chromatin remodeling, and a C-terminal coiled-coil region involved in homodimerization. MORC1 functions as a transcriptional repressor by promoting heterochromatin formation and silencing unsynapsed chromatin during male meiosis. It is highly expressed in testicular germ cells, particularly in pachytene spermatocytes. Loss of MORC1 leads to defective meiotic sex chromosome inactivation (MSCI), meiotic arrest, and apoptosis of spermatocytes, resulting in non-obstructive azoospermia and male infertility.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| MORC1 Knockout HEK293 Cell Line | EDJ-KQ8692 | Human | 27136 | Details Get a Quote |
| MORC1 Knockout HeLa Cell Line | EDJ-KQ56011 | Human | 27136 | Details Get a Quote |
| MORC1 Knockout A-549 Cell Line | EDJ-KQ64499 | Human | 27136 | Details Get a Quote |
| MORC1 Knockout HCT 116 Cell Line | EDJ-KQ72956 | Human | 27136 | Details Get a Quote |
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