MCM3: Minichromosome Maintenance Complex Component 3

A key regulator of DNA replication initiation and cell cycle progression

Gene Information Card

Symbol MCM3
Full Name Minichromosome Maintenance Complex Component 3
Gene Type Protein coding
Chromosomal Location 6p12.2
NCBI Gene ID 4172 ncbi.nlm.nih.gov/gene/4172
Ensembl ID ENSG00000112118
UniProt ID P25205
OMIM ID 602693
HGNC ID 6948
Aliases MCM3 minichromosome maintenance deficient 3, S. cerevisiae; homolog of S. pombe cdc21; DNA replication licensing factor MCM3

Description

MCM3 encodes a component of the minichromosome maintenance (MCM) complex, which is essential for initiating DNA replication. The MCM complex, consisting of MCM2-7, acts as a helicase that unwinds DNA at replication origins. MCM3 is regulated by phosphorylation and interacts with other replication factors. It is widely expressed and plays a critical role in cell cycle control.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Meier-Gorlin syndrome Mutations in MCM3 impair DNA replication licensing, leading to reduced cell proliferation and primordial dwarfism. PMID: 21461991
Breast cancer Overexpression of MCM3 is associated with poor prognosis and increased proliferation. PMID: 25642762
Colorectal cancer Elevated MCM3 expression correlates with tumor progression and metastasis. PMID: 28925394

Expression Profile

Tissue Expression
Tissue nTPM level
Testis 28.5 High
Bone marrow 22.3 High
Lymph node 18.7 High
Brain 10.2 Medium
Liver 8.1 Medium
Heart 5.4 Low
Cell Line Expression
Cell Line nTPM Notes
HeLa 32.1 Cervical cancer cell line
HEK293 27.8 Embryonic kidney cells
MCF7 25.4 Breast cancer cell line
HepG2 20.3 Liver cancer cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.172C>T (p.Arg58Trp) Missense Rare Loss of function; associated with Meier-Gorlin syndrome
c.1015G>A (p.Glu339Lys) Missense Rare Unknown functional effect
c.1342A>G (p.Asn448Asp) Missense Rare Unknown functional effect
Mutation functional classification

Loss of Function (LOF)

Mutations in MCM3 that disrupt helicase activity or complex assembly lead to replication stress and reduced cell proliferation.

Gain of Function (GOF)

Not well documented; overexpression in cancers may confer a proliferative advantage.

Dominant Negative (DN)

Some missense mutations may interfere with wild-type MCM complex function, but evidence is limited.

Gene Ontology (GO)

• DNA replication initiation • DNA helicase activity
• chromatin binding • nucleus
• MCM complex • cell cycle

Pathways

Cell cycle
DNA replication
E2F transcription factor network

Protein Summary

MCM3 is a 808-amino acid protein that forms part of the MCM2-7 hexameric helicase complex. It contains an AAA+ ATPase domain essential for DNA unwinding. The protein is phosphorylated by CDK and DDK kinases, regulating its loading onto chromatin and activation during S phase. MCM3 also interacts with histone modifiers and transcription factors, linking replication to chromatin dynamics.

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