KLF1: Kruppel-like Factor 1 (Erythroid)

Master regulator of erythropoiesis and hemoglobin switching

Gene Information Card

Symbol KLF1
Full Name Kruppel-like factor 1 (erythroid)
Gene Type Protein coding
Chromosomal Location 19p13.13-p13.12
NCBI Gene ID 10661 ncbi.nlm.nih.gov/gene/10661
Ensembl ID ENSG00000105610
UniProt ID Q13351
OMIM ID 600599
HGNC ID 6345
Aliases EKLF, EKLF1, HBFQTL5

Description

KLF1 (Kruppel-like factor 1, also known as EKLF) is a zinc-finger transcription factor essential for erythroid development and differentiation. It directly activates beta-globin gene expression and regulates the switch from fetal (gamma) to adult (beta) hemoglobin. KLF1 also controls expression of many erythroid-specific genes involved in membrane stability, heme synthesis, and cell cycle regulation. Loss-of-function mutations cause congenital dyserythropoietic anemia type IV and the In(Lu) blood group phenotype, while gain-of-function variants are associated with hereditary persistence of fetal hemoglobin (HPFH).

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Congenital dyserythropoietic anemia type IV Biallelic loss-of-function mutations in KLF1 impair erythroid maturation, leading to ineffective erythropoiesis and anemia. ClinVar, OMIM #613673
Hereditary persistence of fetal hemoglobin (HPFH) Gain-of-function or dominant-negative KLF1 variants disrupt hemoglobin switching, maintaining high fetal hemoglobin levels into adulthood. OMIM #142470, NCBI
In(Lu) phenotype (Lutheran blood group) Heterozygous loss-of-function KLF1 mutations reduce BCAM (Lutheran antigen) expression on red cells. ClinVar, OMIM #111150

Expression Profile

Tissue Expression
Tissue nTPM level
Bone marrow 58.2 High
Spleen 12.1 Medium
Whole blood 8.5 Medium
Liver 1.3 Low
Lung 0.4 Not detected
Cell Line Expression
Cell Line nTPM Notes
K562 (erythroleukemia) 45.6 High expression; used in hemoglobin switching studies
HEL (erythroleukemia) 38.2 High expression
TF-1 (erythroblast) 29.8 High expression
HeLa 0.2 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.973G>A (p.Glu325Lys) Missense Rare Loss of DNA-binding; causes CDA type IV
c.304C>T (p.Arg102Trp) Missense Rare Dominant-negative; associated with HPFH
c.519_521del (p.Phe174del) Deletion Rare Loss of function; In(Lu) phenotype
c.892G>A (p.Gly298Arg) Missense Rare Reduced transactivation; CDA type IV
Mutation functional classification

Loss of Function (LOF)

Biallelic loss-of-function mutations (e.g., p.Glu325Lys) impair erythroid maturation, causing congenital dyserythropoietic anemia type IV. Heterozygous loss-of-function leads to In(Lu) phenotype.

Gain of Function (GOF)

Gain-of-function variants (e.g., p.Arg102Trp) enhance gamma-globin expression, resulting in hereditary persistence of fetal hemoglobin (HPFH).

Dominant Negative (DN)

Dominant-negative mutations (e.g., p.Arg102Trp) interfere with wild-type KLF1 activity, disrupting hemoglobin switching and causing HPFH.

Pathways

Erythropoiesis (Reactome: R-HSA-1266738)
Hemoglobin switching (Reactome: R-HSA-983231)
Transcriptional regulation by KLF1 (Reactome: R-HSA-983232)

Protein Summary

KLF1 (EKLF) is a 362-amino acid zinc-finger transcription factor that binds to CACCC boxes in the beta-globin locus control region and promoters. It is essential for definitive erythropoiesis, activating beta-globin and repressing gamma-globin expression. The protein contains three C-terminal C2H2 zinc fingers that mediate DNA binding and an N-terminal transactivation domain. Post-translational modifications include acetylation and phosphorylation, which modulate its activity. KLF1 also interacts with chromatin remodeling complexes (e.g., SWI/SNF) to regulate erythroid gene expression.

Related Products

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KLF10 Knockout HEK293 Cell Line EDJ-KQ2323 Human 7071 Details Get a Quote
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KLF1 Knockout HEK293 Cell Line EDJ-KQ7122 Human 10661 Details Get a Quote
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KLF12 Knockout HEK293 Cell Line EDJ-KQ13947 Human 11278 Details Get a Quote
KLF14 Knockout HEK293 Cell Line EDJ-KQ13948 Human 136259 Details Get a Quote
KLF18 Knockout HEK293 Cell Line EDJ-KQ13949 Human 105378952 Details Get a Quote
KLF11 Knockout A-549 Cell Line EDJ-KQ30101 Human 8462 Details Get a Quote
KLF11 Knockout HCT 116 Cell Line EDJ-KQ30102 Human 8462 Details Get a Quote
KLF11 Knockout HeLa Cell Line EDJ-KQ30103 Human 8462 Details Get a Quote
KLF10 Knockout A-549 Cell Line EDJ-KQ22714 Human 7071 Details Get a Quote
KLF10 Knockout HCT 116 Cell Line EDJ-KQ22715 Human 7071 Details Get a Quote
KLF10 Knockout HeLa Cell Line EDJ-KQ22716 Human 7071 Details Get a Quote
KLF12 Knockout A-549 Cell Line EDJ-KQ43862 Human 11278 Details Get a Quote
Displaying Records 1 To 15 Of 35 Records
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