KCNE1
Potassium Voltage-Gated Channel Subfamily E Regulatory Subunit 1
Gene Information Card
| Symbol | KCNE1 |
|---|---|
| Full Name | Potassium Voltage-Gated Channel Subfamily E Regulatory Subunit 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 21q22.12 |
| NCBI Gene ID | 3753 ncbi.nlm.nih.gov/gene/3753 |
| Ensembl ID | ENSG00000180509 |
| UniProt ID | P15382 |
| OMIM ID | 176261 |
| HGNC ID | 6240 |
| Aliases | minK, LQT5, JLNS2, ISK, LQT2/5 |
Description
KCNE1 encodes the MinK (minimal potassium channel) protein, a single-transmembrane domain beta subunit that assembles with KCNQ1 (Kv7.1) to form the slow delayed rectifier potassium channel (Iks) in cardiac myocytes and with other Kv channels in various tissues. This channel complex is essential for cardiac action potential repolarization and potassium homeostasis in the inner ear. Mutations in KCNE1 cause long QT syndrome type 5 (LQT5) and Jervell and Lange-Nielsen syndrome type 2 (JLNS2), characterized by prolonged QT interval, syncope, sudden cardiac death, and sensorineural deafness.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Long QT Syndrome 5 (LQT5) | Loss-of-function or dominant-negative mutations reduce Iks current, prolonging cardiac repolarization | ClinVar, OMIM |
| Jervell and Lange-Nielsen Syndrome 2 (JLNS2) | Biallelic loss-of-function mutations abolish Iks in heart and inner ear, causing arrhythmia and deafness | OMIM, NCBI |
| Atrial Fibrillation | Rare gain-of-function variants may increase Iks, shortening atrial refractory period | ClinVar, literature |
| Sudden Infant Death Syndrome (SIDS) | Rare KCNE1 variants may predispose to arrhythmia in infancy | ClinVar |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Heart | 12.5 | Medium |
| Inner Ear (cochlea) | 8.3 | Medium |
| Kidney | 6.1 | Low |
| Pancreas | 4.2 | Low |
| Brain | 3.8 | Low |
| Lung | 2.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| iPS-derived cardiomyocytes | 15.2 | High expression |
| HEK293 | 0.5 | Low endogenous |
| SH-SY5Y | 1.8 | Low |
| MCF7 | 0.3 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.253G>A (p.Asp85Asn) | Missense | Rare | Dominant-negative; reduces Iks current; associated with LQT5 |
| c.176C>T (p.Thr58Ile) | Missense | Rare | Loss-of-function; linked to JLNS2 |
| c.1A>G (p.Met1Val) | Start loss | Rare | Complete loss of function; causes JLNS2 |
| c.226G>A (p.Val76Met) | Missense | Rare | Gain-of-function; associated with atrial fibrillation |
Mutation functional classification
Loss of Function (LOF)
Reduced Iks current; prolongs cardiac action potential; causes LQT5 or JLNS2
Gain of Function (GOF)
Increased Iks current; shortens atrial refractory period; may predispose to atrial fibrillation
Dominant Negative (DN)
Mutant subunit disrupts wild-type KCNQ1/KCNE1 channel function; common in LQT5
View complete mutation data:
Gene Ontology (GO)
Pathways
• Cardiac muscle contraction (KEGG: hsa04260)
• Adrenergic signaling in cardiomyocytes (KEGG: hsa04261)
• Long QT syndrome (KEGG: hsa04270)
Protein Summary
KCNE1 encodes MinK, a 129-amino acid single-pass transmembrane protein that functions as a regulatory beta subunit for voltage-gated potassium channels, primarily KCNQ1. MinK modulates channel gating, voltage dependence, and pharmacological sensitivity. The KCNQ1/KCNE1 complex generates the slow delayed rectifier current (Iks) critical for cardiac action potential repolarization. In the inner ear, it maintains potassium homeostasis necessary for hearing. Loss-of-function mutations lead to prolonged QT interval and deafness, while gain-of-function variants may contribute to atrial fibrillation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| KCNE1 Knockout HEK293 Cell Line | EDJ-KQ5024 | Human | 3753 | Details Get a Quote |
| KCNE1 Knockout HeLa Cell Line | EDJ-KQ53707 | Human | 3753 | Details Get a Quote |
| KCNE1 Knockout A-549 Cell Line | EDJ-KQ62185 | Human | 3753 | Details Get a Quote |
| KCNE1 Knockout HCT 116 Cell Line | EDJ-KQ70670 | Human | 3753 | Details Get a Quote |
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