JAK3 Gene - Janus Kinase 3

JAK3: A Key Tyrosine Kinase in Immune Signaling and Severe Combined Immunodeficiency

Gene Information Card

Symbol JAK3
Full Name Janus kinase 3
Gene Type protein-coding
Chromosomal Location 19p13.11
NCBI Gene ID 3718 ncbi.nlm.nih.gov/gene/3718
Ensembl ID ENSG00000105699
UniProt ID P52333
OMIM ID 600173
HGNC ID 6193
Aliases L-JAK, JAKL, L-JAK kinase

Description

JAK3 (Janus kinase 3) is a protein-coding gene that encodes a member of the Janus kinase (JAK) family of tyrosine kinases. This enzyme is predominantly expressed in hematopoietic cells and plays a critical role in cytokine receptor signaling via the JAK-STAT pathway. JAK3 associates with the common gamma chain (γc) of cytokine receptors, including those for interleukins IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Mutations in JAK3 cause autosomal recessive severe combined immunodeficiency (SCID), characterized by a lack of T cells and NK cells with normal B cells (T-B+NK- SCID).

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Severe combined immunodeficiency, autosomal recessive, T-cell negative, B-cell positive, NK-cell negative (T-B+NK- SCID) Loss-of-function mutations in JAK3 disrupt cytokine signaling via the common gamma chain, impairing T-cell and NK-cell development. ClinVar, OMIM
Severe combined immunodeficiency (SCID) JAK3 deficiency leads to defective JAK-STAT signaling, preventing lymphoid progenitor differentiation. OMIM #600173
Acute lymphoblastic leukemia (ALL) Somatic gain-of-function mutations (e.g., R172H) in JAK3 can activate STAT5 signaling, contributing to leukemogenesis. COSMIC, ClinVar

Expression Profile

Tissue Expression
Tissue nTPM level
Bone marrow 12.8 Medium
Spleen 10.5 Medium
Lymph node 9.2 Medium
Thymus 7.4 Low
Whole blood 6.1 Low
Cell Line Expression
Cell Line nTPM Notes
K-562 (leukemia) 15.3 High expression
HEK 293 (embryonic kidney) 2.1 Low expression
Jurkat (T-cell leukemia) 18.7 High expression
HeLa (cervical carcinoma) 3.4 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1715G>A (p.Arg572Gln) Missense Pathogenic in SCID Loss of kinase activity; disrupts ATP binding
c.1960C>T (p.Arg654Trp) Missense Pathogenic in SCID Impaired JAK3-STAT5 signaling
c.514G>A (p.Val172Met) Missense Somatic in ALL Gain-of-function; constitutive STAT5 activation
c.2110C>T (p.Arg704Cys) Missense Likely pathogenic Reduced JAK3 expression and function
Mutation functional classification

Loss of Function (LOF)

Most JAK3 mutations in SCID are loss-of-function, leading to absent or severely reduced kinase activity and defective cytokine signaling.

Gain of Function (GOF)

Somatic missense mutations (e.g., Val172Met) in hematologic malignancies confer constitutive activation of JAK3 and downstream STAT5.

Dominant Negative (DN)

Some JAK3 mutations may exert dominant-negative effects by forming inactive heterodimers with wild-type JAK3, though this is less common.

Pathways

• JAK-STAT signaling pathway (KEGG hsa04630)
• Cytokine-cytokine receptor interaction (KEGG hsa04060)
• IL-2 signaling pathway (Reactome R-HSA-451927)
• IL-7 signaling pathway (Reactome R-HSA-449147)
• Common gamma chain family signaling (Reactome R-HSA-451906)

Protein Summary

JAK3 is a 1124-amino-acid tyrosine kinase with a typical JAK family domain architecture: an N-terminal FERM domain, a SH2-like domain, a pseudokinase domain, and a C-terminal kinase domain. It is essential for signaling through cytokine receptors that utilize the common gamma chain. Upon cytokine binding, JAK3 autophosphorylates and phosphorylates receptor subunits, creating docking sites for STAT transcription factors. JAK3 is predominantly expressed in hematopoietic tissues and is critical for lymphocyte development and function.

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JAK3 (c.1142+13C>A )Point Mutation in HAP1 Cell Line EDC03519 Human 3718 Details Get a Quote
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