IRF7: Master Regulator of Type I Interferon Response
Interferon Regulatory Factor 7 – Key mediator of antiviral immunity and immune homeostasis
Gene Information Card
| Symbol | IRF7 |
|---|---|
| Full Name | Interferon Regulatory Factor 7 |
| Gene Type | Protein coding |
| Chromosomal Location | 11p15.5 |
| NCBI Gene ID | 3665 ncbi.nlm.nih.gov/gene/3665 |
| Ensembl ID | ENSG00000185507 |
| UniProt ID | Q92985 |
| OMIM ID | 605047 |
| HGNC ID | 6122 |
| Aliases | IRF-7, IRF7A, IRF7B, IRF7H |
Description
IRF7 (Interferon Regulatory Factor 7) encodes a transcription factor that plays a central role in the induction of type I interferons (IFN-α/β) in response to viral infection. It is activated by phosphorylation via TBK1 and IKKε following recognition of pathogen-associated molecular patterns by Toll-like receptors (TLRs) and RIG-I-like receptors. IRF7 is constitutively expressed in plasmacytoid dendritic cells and is inducible in other cell types. It regulates the expression of multiple interferon-stimulated genes and is critical for antiviral immunity. Dysregulation of IRF7 is associated with severe viral infections, autoimmune diseases, and certain cancers.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Severe influenza A infection | Loss-of-function mutations impair IFN-α/β production, leading to uncontrolled viral replication | PMID: 25686637, ClinVar |
| Immunodeficiency 39 (IMD39) | Biallelic IRF7 mutations cause primary immunodeficiency with severe respiratory viral infections | OMIM #616345, PMID: 25686637 |
| Systemic lupus erythematosus (SLE) | IRF7 overexpression and genetic variants increase type I IFN signature, contributing to autoimmunity | PMID: 17942819, PMID: 23396275 |
| Chronic hepatitis C | IRF7 polymorphisms influence IFN response and viral clearance | PMID: 19865172 |
| Breast cancer | IRF7 expression correlates with immune infiltration and prognosis; epigenetic silencing may promote tumor immune evasion | COSMIC, PMID: 28476880 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Spleen | 12.5 | High |
| Lung | 8.3 | Medium |
| Whole blood | 7.1 | Medium |
| Lymph node | 6.8 | Medium |
| Bone marrow | 5.4 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HEK 293 | 9.2 | High expression after IFN stimulation |
| HeLa | 6.5 | Moderate basal expression |
| THP-1 | 7.8 | Induced by LPS/IFN-γ |
| Jurkat | 4.1 | Low expression |
| MCF7 | 3.9 | Low expression; upregulated by viral mimic |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1A>G (p.Met1?) | Missense | <0.01% | Loss of start codon; loss of function |
| c.502C>T (p.Arg168Cys) | Missense | <0.01% | Impaired DNA binding; loss of function |
| c.1135C>T (p.Arg379*) | Nonsense | <0.01% | Premature truncation; loss of function |
| c.1496G>A (p.Arg499Gln) | Missense | <0.01% | Reduced transactivation activity |
Mutation functional classification
Loss of Function (LOF)
Biallelic loss-of-function mutations (e.g., p.Arg168Cys, p.Arg379*) cause severe immunodeficiency with impaired type I IFN production.
Gain of Function (GOF)
Gain-of-function mutations are not well documented; overexpression in SLE is considered a risk factor rather than a direct mutation effect.
Dominant Negative (DN)
Dominant-negative effects have been proposed for some missense variants (e.g., p.Arg168Cys) that interfere with wild-type IRF7 dimerization.
View complete mutation data:
Gene Ontology (GO)
| • GO:0000978 – RNA polymerase II cis-regulatory region sequence-specific DNA binding | • GO:0001227 – DNA-binding transcription repressor activity |
| • RNA polymerase II-specific | • GO:0001228 – DNA-binding transcription activator activity |
| • RNA polymerase II-specific | • GO:0005515 – protein binding |
| • GO:0042802 – identical protein binding | • GO:0045087 – innate immune response |
| • GO:0060337 – type I interferon signaling pathway | • GO:0006357 – regulation of transcription by RNA polymerase II |
| • GO:0005737 – cytoplasm | • GO:0005634 – nucleus |
Pathways
• R-HSA-168928 – RIG-I/MDA5 mediated induction of IFN-α/β pathways
• R-HSA-168164 – Toll Like Receptor 3 (TLR3) Cascade
• R-HSA-168176 – Toll Like Receptor 7/8 (TLR7/8) Cascade
• R-HSA-913531 – Interferon Signaling
• R-HSA-1280215 – Cytokine Signaling in Immune system
• WP3932 – Type I interferon induction and signaling
Protein Summary
IRF7 is a 503-amino acid transcription factor containing an N-terminal DNA-binding domain (DBD) with a helix-turn-helix motif, a central constitutive activation domain (CAD), and a C-terminal autoinhibitory domain. Upon viral infection, IRF7 is phosphorylated by TBK1/IKKε, leading to homodimerization or heterodimerization with IRF3, nuclear translocation, and binding to interferon-stimulated response elements (ISREs) to drive transcription of type I IFN genes. IRF7 is considered the master regulator of IFN-α production, especially in plasmacytoid dendritic cells. Its activity is tightly regulated by ubiquitination and sumoylation.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| IRF7 Knockout HEK293 Cell Line | EDJ-KQ993 | Human | 3665 | Details Get a Quote |
| IRF7 Knockout HCT 116 Cell Line | EDJ-KQ20024 | Human | 3665 | Details Get a Quote |
| IRF7 Knockout HeLa Cell Line | EDJ-KQ20025 | Human | 3665 | Details Get a Quote |
| IRF7 Knockout A-549 Cell Line | EDJ-KQ18704 | Human | 3665 | Details Get a Quote |
| Irf7 Knockout IBMDM Cell Line | EDC90299 | Mouse | 54123 | Details Get a Quote |
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