IRF7: Master Regulator of Type I Interferon Response

Interferon Regulatory Factor 7 – Key mediator of antiviral immunity and immune homeostasis

Gene Information Card

Symbol IRF7
Full Name Interferon Regulatory Factor 7
Gene Type Protein coding
Chromosomal Location 11p15.5
NCBI Gene ID 3665 ncbi.nlm.nih.gov/gene/3665
Ensembl ID ENSG00000185507
UniProt ID Q92985
OMIM ID 605047
HGNC ID 6122
Aliases IRF-7, IRF7A, IRF7B, IRF7H

Description

IRF7 (Interferon Regulatory Factor 7) encodes a transcription factor that plays a central role in the induction of type I interferons (IFN-α/β) in response to viral infection. It is activated by phosphorylation via TBK1 and IKKε following recognition of pathogen-associated molecular patterns by Toll-like receptors (TLRs) and RIG-I-like receptors. IRF7 is constitutively expressed in plasmacytoid dendritic cells and is inducible in other cell types. It regulates the expression of multiple interferon-stimulated genes and is critical for antiviral immunity. Dysregulation of IRF7 is associated with severe viral infections, autoimmune diseases, and certain cancers.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Severe influenza A infection Loss-of-function mutations impair IFN-α/β production, leading to uncontrolled viral replication PMID: 25686637, ClinVar
Immunodeficiency 39 (IMD39) Biallelic IRF7 mutations cause primary immunodeficiency with severe respiratory viral infections OMIM #616345, PMID: 25686637
Systemic lupus erythematosus (SLE) IRF7 overexpression and genetic variants increase type I IFN signature, contributing to autoimmunity PMID: 17942819, PMID: 23396275
Chronic hepatitis C IRF7 polymorphisms influence IFN response and viral clearance PMID: 19865172
Breast cancer IRF7 expression correlates with immune infiltration and prognosis; epigenetic silencing may promote tumor immune evasion COSMIC, PMID: 28476880

Expression Profile

Tissue Expression
Tissue nTPM level
Spleen 12.5 High
Lung 8.3 Medium
Whole blood 7.1 Medium
Lymph node 6.8 Medium
Bone marrow 5.4 Low
Cell Line Expression
Cell Line nTPM Notes
HEK 293 9.2 High expression after IFN stimulation
HeLa 6.5 Moderate basal expression
THP-1 7.8 Induced by LPS/IFN-γ
Jurkat 4.1 Low expression
MCF7 3.9 Low expression; upregulated by viral mimic
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1A>G (p.Met1?) Missense <0.01% Loss of start codon; loss of function
c.502C>T (p.Arg168Cys) Missense <0.01% Impaired DNA binding; loss of function
c.1135C>T (p.Arg379*) Nonsense <0.01% Premature truncation; loss of function
c.1496G>A (p.Arg499Gln) Missense <0.01% Reduced transactivation activity
Mutation functional classification

Loss of Function (LOF)

Biallelic loss-of-function mutations (e.g., p.Arg168Cys, p.Arg379*) cause severe immunodeficiency with impaired type I IFN production.

Gain of Function (GOF)

Gain-of-function mutations are not well documented; overexpression in SLE is considered a risk factor rather than a direct mutation effect.

Dominant Negative (DN)

Dominant-negative effects have been proposed for some missense variants (e.g., p.Arg168Cys) that interfere with wild-type IRF7 dimerization.

Gene Ontology (GO)

• GO:0000978 – RNA polymerase II cis-regulatory region sequence-specific DNA binding • GO:0001227 – DNA-binding transcription repressor activity
• RNA polymerase II-specific • GO:0001228 – DNA-binding transcription activator activity
• RNA polymerase II-specific • GO:0005515 – protein binding
• GO:0042802 – identical protein binding • GO:0045087 – innate immune response
• GO:0060337 – type I interferon signaling pathway • GO:0006357 – regulation of transcription by RNA polymerase II
• GO:0005737 – cytoplasm • GO:0005634 – nucleus

Pathways

R-HSA-168928 – RIG-I/MDA5 mediated induction of IFN-α/β pathways
R-HSA-168164 – Toll Like Receptor 3 (TLR3) Cascade
R-HSA-168176 – Toll Like Receptor 7/8 (TLR7/8) Cascade
R-HSA-913531 – Interferon Signaling
R-HSA-1280215 – Cytokine Signaling in Immune system
WP3932 – Type I interferon induction and signaling

Protein Summary

IRF7 is a 503-amino acid transcription factor containing an N-terminal DNA-binding domain (DBD) with a helix-turn-helix motif, a central constitutive activation domain (CAD), and a C-terminal autoinhibitory domain. Upon viral infection, IRF7 is phosphorylated by TBK1/IKKε, leading to homodimerization or heterodimerization with IRF3, nuclear translocation, and binding to interferon-stimulated response elements (ISREs) to drive transcription of type I IFN genes. IRF7 is considered the master regulator of IFN-α production, especially in plasmacytoid dendritic cells. Its activity is tightly regulated by ubiquitination and sumoylation.

Related Products

Product name Cat.No. Species Gene ID
IRF7 Knockout HEK293 Cell Line EDJ-KQ993 Human 3665 Details Get a Quote
IRF7 Knockout HCT 116 Cell Line EDJ-KQ20024 Human 3665 Details Get a Quote
IRF7 Knockout HeLa Cell Line EDJ-KQ20025 Human 3665 Details Get a Quote
IRF7 Knockout A-549 Cell Line EDJ-KQ18704 Human 3665 Details Get a Quote
Irf7 Knockout IBMDM Cell Line EDC90299 Mouse 54123 Details Get a Quote
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