INA Gene - Internexin Neuronal Intermediate Filament Protein Alpha

Comprehensive gene card for INA, encoding alpha-internexin, a neuronal intermediate filament protein involved in neurofilament assembly and associated with neurodegenerative disorders.

Gene Information Card

Symbol INA
Full Name Internexin Neuronal Intermediate Filament Protein Alpha
Gene Type Protein coding
Chromosomal Location 10q24.33
NCBI Gene ID 9118 ncbi.nlm.nih.gov/gene/9118
Ensembl ID ENSG00000148795
UniProt ID Q16352
OMIM ID 605338
HGNC ID 6057
Aliases NF-66, alpha-internexin, NEF5, FLJ26666

Description

The INA gene encodes alpha-internexin, a 66 kDa neuronal intermediate filament protein. It is a key component of the neuronal cytoskeleton, involved in neurofilament assembly and axonal transport. Mutations and dysregulation of INA are associated with neurodegenerative diseases such as amyotrophic lateral sclerosis (ALS) and Charcot-Marie-Tooth disease.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Amyotrophic Lateral Sclerosis (ALS) Accumulation of alpha-internexin in neuronal inclusions; altered neurofilament dynamics ClinVar, OMIM
Charcot-Marie-Tooth Disease Missense mutations in INA disrupt neurofilament assembly, leading to peripheral neuropathy ClinVar, OMIM
Neurodegeneration with Brain Iron Accumulation (NBIA) Potential involvement in protein aggregation pathways NCBI Gene, OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 45.2 High
Spinal Cord 38.1 High
Peripheral Nerve 22.5 Medium
Heart 1.3 Low
Liver 0.2 Not detected
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) 35.0 Neuronal model, high expression
U-87 MG (glioblastoma) 12.4 Glial cell line, moderate expression
HeLa (cervical carcinoma) 0.5 Non-neuronal, low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.151G>A (p.Glu51Lys) Missense Rare Alters filament assembly; associated with Charcot-Marie-Tooth disease
c.802C>T (p.Arg268Cys) Missense Rare Impaired neurofilament network; reported in ALS
c.1129A>G (p.Ile377Val) Missense 0.01% Likely benign; population variant
Mutation functional classification

Loss of Function (LOF)

Loss-of-function mutations in INA are rare; they may disrupt neurofilament assembly and axonal transport, contributing to neurodegeneration.

Gain of Function (GOF)

Gain-of-function mechanisms are not well established for INA; however, aggregation-prone variants may exert toxic effects.

Dominant Negative (DN)

Dominant-negative mutations (e.g., p.Glu51Lys) interfere with wild-type alpha-internexin incorporation into filaments, leading to cytoskeletal dysfunction.

Pathways

• Neurofilament assembly (Reactome: R-HSA-5250911)
• Axonal transport (KEGG: hsa04724)
• Intermediate filament organization (GO:0045109)

Protein Summary

Alpha-internexin (UniProt Q16352) is a 499-amino acid neuronal intermediate filament protein. It forms homopolymers and heteropolymers with other neurofilament proteins (NEFL, NEFM, NEFH) to build the axonal cytoskeleton. The protein contains a central alpha-helical rod domain flanked by non-helical head and tail domains. Post-translational modifications include phosphorylation, which regulates filament assembly and stability. Alpha-internexin is critical for neuronal morphology and axonal caliber.

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