HR Gene (Lysine Demethylase and Nuclear Receptor Corepressor)

HR: Hair Growth Regulator, Lysine Demethylase

Gene Information Card

Symbol HR
Full Name Hair growth regulator (lysine demethylase and nuclear receptor corepressor)
Gene Type Protein coding
Chromosomal Location 8p21.3
NCBI Gene ID 55806 ncbi.nlm.nih.gov/gene/55806
Ensembl ID ENSG00000168484
UniProt ID O43593
OMIM ID 602302
HGNC ID 5172
Aliases ALUNC, AU, HSA277165, hairless, hr

Description

The HR gene encodes a protein that functions as a lysine-specific demethylase and a nuclear receptor corepressor. It is essential for normal hair growth and cycling. Loss-of-function mutations in HR cause congenital atrichia with papular lesions (APL) and alopecia universalis congenita (ALUNC). The protein represses transcription of hair-specific genes by interacting with histone deacetylases and thyroid hormone receptor.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Atrichia with papular lesions (APL) Loss-of-function mutations in HR disrupt hair follicle cycling, leading to irreversible hair loss and development of papules. OMIM #209500
Alopecia universalis congenita (ALUNC) Biallelic null mutations cause complete absence of scalp and body hair from birth. OMIM #203655
Alopecia areata (susceptibility) Polymorphisms in HR may contribute to autoimmune-mediated hair loss. ClinVar, GWAS

Expression Profile

Tissue Expression
Tissue nTPM level
Skin 12.5 Medium
Brain 1.2 Low
Testis 0.8 Low
Thyroid 0.5 Low
Cell Line Expression
Cell Line nTPM Notes
HaCaT (keratinocyte) 8.3 Moderate expression
HEK293 0.4 Low expression
SH-SY5Y 0.2 Very low
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.3434delC (p.Pro1145Leufs*5) Frameshift Rare Loss of function; causes APL
c.2672G>A (p.Trp891*) Nonsense Rare Premature stop; causes ALUNC
c.1891C>T (p.Arg631*) Nonsense Rare Loss of function; associated with papular atrichia
Mutation functional classification

Loss of Function (LOF)

Most HR mutations are loss-of-function, leading to truncated or unstable protein that cannot repress target genes, resulting in hair loss.

Gain of Function (GOF)

Not reported.

Dominant Negative (DN)

Not reported; inheritance is autosomal recessive.

Pathways

• Thyroid hormone signaling pathway (Reactome: R-HSA-376172)
• Transcriptional regulation by the AP-2 family (Reactome: R-HSA-8866907)
• Chromatin modifying enzymes (Reactome: R-HSA-3247509)

Protein Summary

The HR protein (UniProt O43593) is a 1189-amino acid nuclear protein containing a JmjC domain that confers lysine demethylase activity specific for histone H3 lysine 4 (H3K4me2/me3). It also contains a C-terminal region that mediates interaction with nuclear receptors and corepressors such as NCOR1 and HDACs. HR represses transcription of genes involved in hair follicle differentiation and cycling. Loss of HR function leads to inability to transition from catagen to telogen, causing permanent hair loss.

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