HOMER1

Homer scaffold protein 1

Gene Information Card

Symbol HOMER1
Full Name homer scaffold protein 1
Gene Type protein-coding
Chromosomal Location 5q14.1
NCBI Gene ID 9456 ncbi.nlm.nih.gov/gene/9456
Ensembl ID ENSG00000152413
UniProt ID Q86YM7
OMIM ID 604797
HGNC ID 17512
Aliases HOMER, HOMER1A, HOMER1B, HOMER1C, VESL-1

Description

HOMER1 encodes a member of the Homer family of scaffold proteins that regulate group I metabotropic glutamate receptor (mGluR1/5) signaling and synaptic plasticity. The protein contains an N-terminal Ena/VASP homology 1 (EVH1) domain that binds proline-rich motifs in target proteins and a C-terminal coiled-coil domain mediating multimerization. Alternative splicing generates isoforms with distinct C-termini, including a short dominant-negative isoform (HOMER1A) induced by neuronal activity. HOMER1 is involved in calcium signaling, dendritic spine morphogenesis, and behavioral responses to drugs of abuse.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Schizophrenia Altered HOMER1 expression and splicing may disrupt glutamatergic signaling and synaptic plasticity Association studies (PMID: 18445412)
Bipolar disorder Dysregulation of HOMER1 isoforms linked to mood instability and lithium response Genetic association (PMID: 20080012)
Major depressive disorder Reduced HOMER1 levels in prefrontal cortex may impair mGluR signaling Postmortem brain studies (PMID: 21041692)
Autism spectrum disorder Rare variants in HOMER1 identified in ASD cohorts Exome sequencing (PMID: 25363760)
Fragile X syndrome HOMER1 dysregulation contributes to exaggerated mGluR-dependent LTD Animal models (PMID: 17956729)

Expression Profile

Tissue Expression
Tissue nTPM level
Cerebral cortex 28.5 High
Hippocampus 32.1 High
Cerebellum 25.3 High
Testis 15.2 Medium
Heart 8.7 Low
Liver 2.1 Not detected
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) 18.4 Neuronal model
U-87 MG (glioblastoma) 12.1 Astrocytic
HEK 293 (embryonic kidney) 6.3 Low expression
HepG2 (hepatocellular carcinoma) 1.2 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1A>G (p.Met1?) Missense <0.01% Loss of start codon; likely loss of function
c.748C>T (p.Arg250*) Nonsense <0.01% Premature stop; loss of function
c.1123G>A (p.Gly375Arg) Missense <0.01% Unknown significance; reported in ASD
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift variants leading to truncated protein or nonsense-mediated decay.

Gain of Function (GOF)

Not well characterized; some missense variants may alter scaffolding properties.

Dominant Negative (DN)

The short isoform HOMER1A acts as a natural dominant-negative regulator of longer isoforms.

Pathways

Metabotropic glutamate receptor signaling (Reactome: R-HSA-420092)
Long-term depression (Reactome: R-HSA-438066)
CREB phosphorylation (Reactome: R-HSA-111931)

Protein Summary

HOMER1 is a scaffold protein that links metabotropic glutamate receptors (mGluR1/5) to intracellular calcium stores and signaling complexes. It plays a critical role in synaptic plasticity, dendritic spine morphology, and neuronal excitability. The protein has multiple isoforms generated by alternative splicing, with HOMER1A acting as an activity-induced dominant-negative regulator. Dysregulation of HOMER1 is implicated in neuropsychiatric disorders including schizophrenia, bipolar disorder, and autism spectrum disorder.

Related Products

Product name Cat.No. Species Gene ID
HOMER1 Knockout HEK293 Cell Line EDJ-KQ920 Human 9456 Details Get a Quote
HOMER1 Knockout A-549 Cell Line EDJ-KQ21170 Human 9456 Details Get a Quote
HOMER1 Knockout HCT 116 Cell Line EDJ-KQ21172 Human 9456 Details Get a Quote
HOMER1 Knockout HeLa Cell Line EDJ-KQ21173 Human 9456 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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