HOMER1
Homer scaffold protein 1
Gene Information Card
| Symbol | HOMER1 |
|---|---|
| Full Name | homer scaffold protein 1 |
| Gene Type | protein-coding |
| Chromosomal Location | 5q14.1 |
| NCBI Gene ID | 9456 ncbi.nlm.nih.gov/gene/9456 |
| Ensembl ID | ENSG00000152413 |
| UniProt ID | Q86YM7 |
| OMIM ID | 604797 |
| HGNC ID | 17512 |
| Aliases | HOMER, HOMER1A, HOMER1B, HOMER1C, VESL-1 |
Description
HOMER1 encodes a member of the Homer family of scaffold proteins that regulate group I metabotropic glutamate receptor (mGluR1/5) signaling and synaptic plasticity. The protein contains an N-terminal Ena/VASP homology 1 (EVH1) domain that binds proline-rich motifs in target proteins and a C-terminal coiled-coil domain mediating multimerization. Alternative splicing generates isoforms with distinct C-termini, including a short dominant-negative isoform (HOMER1A) induced by neuronal activity. HOMER1 is involved in calcium signaling, dendritic spine morphogenesis, and behavioral responses to drugs of abuse.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Schizophrenia | Altered HOMER1 expression and splicing may disrupt glutamatergic signaling and synaptic plasticity | Association studies (PMID: 18445412) |
| Bipolar disorder | Dysregulation of HOMER1 isoforms linked to mood instability and lithium response | Genetic association (PMID: 20080012) |
| Major depressive disorder | Reduced HOMER1 levels in prefrontal cortex may impair mGluR signaling | Postmortem brain studies (PMID: 21041692) |
| Autism spectrum disorder | Rare variants in HOMER1 identified in ASD cohorts | Exome sequencing (PMID: 25363760) |
| Fragile X syndrome | HOMER1 dysregulation contributes to exaggerated mGluR-dependent LTD | Animal models (PMID: 17956729) |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Cerebral cortex | 28.5 | High |
| Hippocampus | 32.1 | High |
| Cerebellum | 25.3 | High |
| Testis | 15.2 | Medium |
| Heart | 8.7 | Low |
| Liver | 2.1 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | 18.4 | Neuronal model |
| U-87 MG (glioblastoma) | 12.1 | Astrocytic |
| HEK 293 (embryonic kidney) | 6.3 | Low expression |
| HepG2 (hepatocellular carcinoma) | 1.2 | Not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1A>G (p.Met1?) | Missense | <0.01% | Loss of start codon; likely loss of function |
| c.748C>T (p.Arg250*) | Nonsense | <0.01% | Premature stop; loss of function |
| c.1123G>A (p.Gly375Arg) | Missense | <0.01% | Unknown significance; reported in ASD |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift variants leading to truncated protein or nonsense-mediated decay.
Gain of Function (GOF)
Not well characterized; some missense variants may alter scaffolding properties.
Dominant Negative (DN)
The short isoform HOMER1A acts as a natural dominant-negative regulator of longer isoforms.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Metabotropic glutamate receptor signaling (Reactome: R-HSA-420092)
• Long-term depression (Reactome: R-HSA-438066)
• CREB phosphorylation (Reactome: R-HSA-111931)
Protein Summary
HOMER1 is a scaffold protein that links metabotropic glutamate receptors (mGluR1/5) to intracellular calcium stores and signaling complexes. It plays a critical role in synaptic plasticity, dendritic spine morphology, and neuronal excitability. The protein has multiple isoforms generated by alternative splicing, with HOMER1A acting as an activity-induced dominant-negative regulator. Dysregulation of HOMER1 is implicated in neuropsychiatric disorders including schizophrenia, bipolar disorder, and autism spectrum disorder.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| HOMER1 Knockout HEK293 Cell Line | EDJ-KQ920 | Human | 9456 | Details Get a Quote |
| HOMER1 Knockout A-549 Cell Line | EDJ-KQ21170 | Human | 9456 | Details Get a Quote |
| HOMER1 Knockout HCT 116 Cell Line | EDJ-KQ21172 | Human | 9456 | Details Get a Quote |
| HOMER1 Knockout HeLa Cell Line | EDJ-KQ21173 | Human | 9456 | Details Get a Quote |
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