GMDS (GDP-Mannose 4,6-Dehydratase)
A key enzyme in GDP-fucose biosynthesis, implicated in congenital disorders of glycosylation and cancer.
Gene Information Card
| Symbol | GMDS |
|---|---|
| Full Name | GDP-mannose 4,6-dehydratase |
| Gene Type | protein-coding |
| Chromosomal Location | 6p21.1 |
| NCBI Gene ID | 2762 ncbi.nlm.nih.gov/gene/2762 |
| Ensembl ID | ENSG00000112699 |
| UniProt ID | O60547 |
| OMIM ID | 602884 |
| HGNC ID | 4370 |
| Aliases | GMD, SDR3E1, MGC119718 |
Description
The GMDS gene encodes GDP-mannose 4,6-dehydratase, a key enzyme in the de novo synthesis of GDP-fucose, which is essential for fucosylation of glycoproteins and glycolipids. Fucosylation plays critical roles in cell adhesion, immune response, and development. Mutations in GMDS cause congenital disorder of glycosylation type IIc (CDG IIc, also known as leukocyte adhesion deficiency type II), and altered expression is associated with cancer progression.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Congenital disorder of glycosylation type IIc (CDG IIc) / Leukocyte adhesion deficiency type II | Loss-of-function mutations in GMDS impair GDP-fucose synthesis, leading to defective fucosylation of selectin ligands on leukocytes, causing recurrent infections, developmental delay, and dysmorphism. | OMIM #266265 |
| Colorectal cancer | Reduced GMDS expression leads to decreased fucosylation, promoting metastasis and poor prognosis. | PMID: 23376921 |
| Hepatocellular carcinoma | GMDS downregulation correlates with aggressive tumor features and shorter survival. | PMID: 25944712 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 12.5 | Medium |
| Pancreas | 8.3 | Medium |
| Kidney | 7.1 | Medium |
| Lung | 6.4 | Medium |
| Brain | 2.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 (liver) | 14.2 | High expression |
| A549 (lung) | 6.8 | Moderate expression |
| HEK293 (embryonic kidney) | 5.5 | Moderate expression |
| K562 (leukemia) | 1.3 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.499C>T (p.Arg167*) | Nonsense | Rare | Loss of function; associated with CDG IIc |
| c.692G>A (p.Arg231His) | Missense | Rare | Impaired enzyme activity; CDG IIc |
| c.1A>G (p.Met1?) | Start loss | Rare | Loss of function; CDG IIc |
Mutation functional classification
Loss of Function (LOF)
Most reported mutations in GMDS are loss-of-function, leading to reduced or absent GDP-mannose 4,6-dehydratase activity and defective fucosylation.
Gain of Function (GOF)
No gain-of-function mutations have been reported for GMDS.
Dominant Negative (DN)
No dominant-negative mutations have been described for GMDS.
View complete mutation data:
Gene Ontology (GO)
| • GDP-mannose 4 (GO:0008446) | • mannose metabolic process (GO:0006013) |
| • glucose metabolic process (GO:0006006) | • cytosol (GO:0005829) |
Pathways
• GDP-fucose biosynthesis (de novo pathway)
• Fucosylation of glycoproteins and glycolipids
• Metabolism of carbohydrates
Protein Summary
GDP-mannose 4,6-dehydratase (GMDS) is a 42 kDa cytosolic enzyme that catalyzes the conversion of GDP-mannose to GDP-4-keto-6-deoxymannose, the first committed step in the de novo synthesis of GDP-fucose. The enzyme belongs to the short-chain dehydrogenase/reductase (SDR) family. GDP-fucose is the donor substrate for fucosyltransferases, which add fucose residues to glycans. Proper fucosylation is critical for selectin-mediated leukocyte adhesion, immune surveillance, and cell signaling. Loss of GMDS function leads to CDG IIc, while reduced expression in cancers correlates with metastatic potential.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| GMDS Knockout HEK293 Cell Line | EDJ-KQ4727 | Human | 2762 | Details Get a Quote |
| GMDS Knockout HCT 116 Cell Line | EDJ-KQ26226 | Human | 2762 | Details Get a Quote |
| GMDS Knockout A-549 Cell Line | EDJ-KQ27462 | Human | 2762 | Details Get a Quote |
| GMDS Knockout HeLa Cell Line | EDJ-KQ27464 | Human | 2762 | Details Get a Quote |
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