FLT3 Gene: Fms Related Receptor Tyrosine Kinase 3

A key regulator of hematopoiesis and a major driver in acute myeloid leukemia (AML)

Gene Information Card

Symbol FLT3
Full Name Fms Related Receptor Tyrosine Kinase 3
Gene Type protein-coding
Chromosomal Location 13q12.2
NCBI Gene ID 2322 ncbi.nlm.nih.gov/gene/2322
Ensembl ID ENSG00000122025
UniProt ID P36888
OMIM ID 136351
HGNC ID 3765
Aliases CD135, FLK2, STK1

Description

FLT3 (Fms Related Receptor Tyrosine Kinase 3) encodes a class III receptor tyrosine kinase that regulates hematopoiesis, particularly the survival, proliferation, and differentiation of hematopoietic stem and progenitor cells. The receptor is activated by binding of the FLT3 ligand (FL), leading to dimerization and downstream signaling via PI3K/AKT, RAS/MAPK, and STAT5 pathways. FLT3 is frequently mutated in acute myeloid leukemia (AML), with internal tandem duplications (ITD) in the juxtamembrane domain and point mutations in the tyrosine kinase domain (TKD) being the most common activating alterations.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Acute Myeloid Leukemia (AML) Activating mutations (ITD, TKD) cause constitutive FLT3 signaling, promoting leukemic blast proliferation and survival. ClinVar, COSMIC, NCBI
Acute Lymphoblastic Leukemia (ALL) FLT3 overexpression or rare activating mutations contribute to leukemogenesis in a subset of B-ALL and T-ALL cases. ClinVar, COSMIC
Myelodysplastic Syndromes (MDS) FLT3 mutations, especially ITD, are associated with progression to AML and poor prognosis. ClinVar, NCBI

Expression Profile

Tissue Expression
Tissue nTPM level
Bone Marrow 38.2 High
Spleen 10.5 Medium
Lymph Node 8.1 Medium
Thymus 6.3 Low
Peripheral Blood Mononuclear Cells 5.0 Low
Cell Line Expression
Cell Line nTPM Notes
OCI-AML3 45.2 AML cell line; high FLT3 expression
MV4-11 62.8 AML cell line; FLT3-ITD positive
MOLM-13 55.1 AML cell line; FLT3-ITD positive
THP-1 12.3 AML cell line; low FLT3 expression
K-562 3.5 CML cell line; very low FLT3 expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
FLT3-ITD (internal tandem duplication) Insertion/duplication in juxtamembrane domain ~25-30% of AML Constitutive activation of receptor; poor prognosis
FLT3-TKD (D835Y, D835H, I836del) Missense or deletion in tyrosine kinase domain ~7-10% of AML Constitutive activation; variable response to inhibitors
FLT3-N676K Missense in juxtamembrane domain <1% of AML Activating mutation; confers resistance to some TKIs
Mutation functional classification

Loss of Function (LOF)

Rare nonsense or frameshift mutations leading to truncated, non-functional receptor; not commonly reported in cancer.

Gain of Function (GOF)

FLT3-ITD and FLT3-TKD mutations result in ligand-independent dimerization and constitutive kinase activity, driving proliferation and survival of leukemic cells.

Dominant Negative (DN)

Not described for FLT3; mutations are typically activating and dominant in cis.

Gene Ontology (GO)

• GO:0005524 - ATP binding • GO:0004713 - protein tyrosine kinase activity
• GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway • GO:0030154 - cell differentiation
• GO:0042127 - regulation of cell population proliferation • GO:0008283 - cell population proliferation
• GO:0016021 - integral component of membrane

Pathways

PI3K/AKT signaling pathway
RAS/MAPK signaling pathway
JAK/STAT signaling pathway (STAT5)
FLT3 signaling in hematopoiesis
Acute myeloid leukemia (AML) pathway

Protein Summary

FLT3 (CD135) is a 993-amino acid transmembrane receptor tyrosine kinase expressed primarily on hematopoietic stem and progenitor cells. The extracellular domain contains five immunoglobulin-like domains, followed by a single transmembrane helix, a juxtamembrane domain, and a split intracellular tyrosine kinase domain. Upon FL binding, FLT3 dimerizes and autophosphorylates, activating downstream signaling cascades that promote cell survival, proliferation, and differentiation. Mutations in FLT3, particularly ITD and TKD, are among the most common genetic alterations in AML and are targets for tyrosine kinase inhibitors such as midostaurin, gilteritinib, and quizartinib.

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Displaying Records 1 To 15 Of 17 Records
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