FBXO31: F-box Protein 31 – A Key Regulator of Cell Cycle and DNA Damage Response
Comprehensive genomic and functional analysis of FBXO31, a substrate-recognition component of the SCF ubiquitin ligase complex implicated in tumor suppression and neurodevelopment.
Gene Information Card
| Symbol | FBXO31 |
|---|---|
| Full Name | F-box protein 31 |
| Gene Type | Protein coding |
| Chromosomal Location | 16q24.2 |
| NCBI Gene ID | 79791 ncbi.nlm.nih.gov/gene/79791 |
| Ensembl ID | ENSG00000103257 |
| UniProt ID | Q5XUX0 |
| OMIM ID | 609102 |
| HGNC ID | 16510 |
| Aliases | FBX31, F-box only protein 31, MGC13170 |
Description
FBXO31 (F-box protein 31) is a member of the F-box protein family, characterized by an F-box domain that mediates protein-protein interactions in SCF (SKP1-CUL1-F-box) ubiquitin ligase complexes. FBXO31 functions as the substrate-recognition component, targeting specific proteins for ubiquitination and subsequent proteasomal degradation. It plays critical roles in cell cycle regulation, particularly in G1 phase arrest following DNA damage, by promoting the degradation of cyclin D1. FBXO31 also participates in DNA repair pathways and has been implicated as a tumor suppressor in several cancers, including breast, liver, and gastric cancers. Germline mutations in FBXO31 are associated with autosomal recessive intellectual disability and microcephaly.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Breast cancer | Loss of FBXO31 expression leads to cyclin D1 accumulation, promoting cell cycle progression and tumorigenesis. | PMID: 19287373, 22922726 |
| Hepatocellular carcinoma | FBXO31 downregulation correlates with poor prognosis; FBXO31 suppresses EMT and metastasis via Snail degradation. | PMID: 25720963, 29367642 |
| Gastric cancer | FBXO31 acts as a tumor suppressor by inducing G1 arrest; reduced expression associated with advanced stage. | PMID: 25944712 |
| Autosomal recessive intellectual disability with microcephaly | Homozygous loss-of-function mutations in FBXO31 disrupt neurodevelopment. | PMID: 23911367 |
| Ovarian cancer | FBXO31 overexpression inhibits proliferation and induces apoptosis. | PMID: 27683190 |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 6.2 | Low |
| Breast | 4.8 | Low |
| Liver | 3.1 | Low |
| Testis | 8.5 | Medium |
| Lymph node | 2.0 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| MCF7 (breast cancer) | 5.1 | Moderate expression |
| HepG2 (liver cancer) | 3.8 | Low expression |
| HEK293 (embryonic kidney) | 7.2 | Medium expression |
| HeLa (cervical cancer) | 4.5 | Low expression |
| SH-SY5Y (neuroblastoma) | 6.9 | Medium expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1003C>T (p.Arg335*) | Nonsense | Rare | Loss of function; truncation of F-box and substrate-binding domains |
| c.1270G>A (p.Glu424Lys) | Missense | Rare | Impaired substrate recognition; associated with microcephaly |
| c.1462C>T (p.Arg488Trp) | Missense | Rare | Reduced protein stability; linked to intellectual disability |
| c.1A>G (p.Met1?) | Start loss | Very rare | Complete loss of translation; pathogenic |
Mutation functional classification
Loss of Function (LOF)
Nonsense, frameshift, and start-loss mutations that abolish FBXO31 protein expression or disrupt the F-box domain, leading to impaired ubiquitin ligase activity and accumulation of substrates such as cyclin D1.
Gain of Function (GOF)
No activating mutations have been reported; FBXO31 primarily acts as a tumor suppressor.
Dominant Negative (DN)
Missense mutations in the substrate-binding domain may compete with wild-type FBXO31 for substrate binding, reducing overall degradation capacity.
View complete mutation data:
Gene Ontology (GO)
| • protein binding (GO:0005515) | • ubiquitin-dependent protein catabolic process (GO:0006511) |
| • protein ubiquitination (GO:0016567) | • cell cycle (GO:0007049) |
| • cellular response to DNA damage stimulus (GO:0006974) | • cytoplasm (GO:0005737) |
| • nucleus (GO:0005634) | • SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (GO:0031146) |
Pathways
• SCF ubiquitin ligase complex pathway (Reactome: R-HSA-8951664)
• G1/S transition (Reactome: R-HSA-69206)
• p53-independent DNA damage response (PMID: 19287373)
Protein Summary
FBXO31 encodes a 538-amino acid protein containing an N-terminal F-box domain (residues 36–79) and a C-terminal substrate-binding region. It assembles with SKP1, CUL1, and RBX1 to form the SCF(FBXO31) E3 ubiquitin ligase complex. The protein is predominantly cytoplasmic but can translocate to the nucleus upon DNA damage. Key substrates include cyclin D1 (for G1 arrest) and Snail (for EMT suppression). FBXO31 is widely expressed, with highest levels in testis and brain. Post-translational modifications include phosphorylation, which may regulate its stability and activity.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| FBXO31 Knockout HEK293 Cell Line | EDJ-KQ7448 | Human | 79791 | Details Get a Quote |
| FBXO31 Knockout HCT 116 Cell Line | EDJ-KQ31297 | Human | 79791 | Details Get a Quote |
| FBXO31 Knockout A-549 Cell Line | EDJ-KQ32659 | Human | 79791 | Details Get a Quote |
| FBXO31 Knockout HeLa Cell Line | EDJ-KQ32660 | Human | 79791 | Details Get a Quote |
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