FANCB: Fanconi Anemia Complementation Group B

A key component of the FA core complex involved in DNA interstrand crosslink repair and bone marrow failure syndrome

Gene Information Card

Symbol FANCB
Full Name FA complementation group B
Gene Type protein-coding
Chromosomal Location Xp22.2
NCBI Gene ID 2187 ncbi.nlm.nih.gov/gene/2187
Ensembl ID ENSG00000181544
UniProt ID Q8NB91
OMIM ID 300515
HGNC ID 3583
Aliases FAAP95, FA-B, FAB, FANCB1

Description

FANCB encodes a protein that is a component of the Fanconi anemia (FA) core complex, which is essential for the repair of DNA interstrand crosslinks (ICLs). The FA core complex monoubiquitinates FANCD2 and FANCI, targeting them to chromatin to facilitate downstream repair. FANCB is required for the stability and nuclear localization of the core complex. Mutations in FANCB cause Fanconi anemia complementation group B, an X-linked recessive disorder characterized by bone marrow failure, congenital abnormalities, and predisposition to acute myeloid leukemia and solid tumors.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Fanconi anemia complementation group B Loss of FANCB function disrupts FA core complex assembly, preventing FANCD2/FANCI monoubiquitination and ICL repair, leading to genomic instability and bone marrow failure. OMIM #300514; ClinVar; NCBI Gene
Acute myeloid leukemia (secondary) FA pathway deficiency due to FANCB mutations increases susceptibility to leukemic transformation. COSMIC; ClinVar
Squamous cell carcinoma (head and neck) Impaired DNA repair in FA patients predisposes to epithelial cancers. COSMIC; OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Bone marrow 2.1 Low
Testis 4.3 Medium
Spleen 1.8 Low
Thymus 2.5 Low
Lymph node 1.9 Low
Cell Line Expression
Cell Line nTPM Notes
HEK 293 3.2 Embryonic kidney; moderate expression
K562 1.5 Chronic myeloid leukemia; low expression
HeLa 2.0 Cervical carcinoma; low expression
HepG2 1.8 Hepatocellular carcinoma; low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.482_483delAG Frameshift Unknown Loss of function; truncation
c.839G>A (p.Trp280*) Nonsense Unknown Premature stop; loss of function
c.1123C>T (p.Arg375*) Nonsense Unknown Loss of function
c.1471C>T (p.Arg491*) Nonsense Unknown Loss of function
Mutation functional classification

Loss of Function (LOF)

Majority of reported FANCB mutations are loss-of-function (nonsense, frameshift, splice-site) leading to truncated or absent protein, resulting in FA core complex dysfunction.

Gain of Function (GOF)

No gain-of-function mutations reported for FANCB.

Dominant Negative (DN)

No dominant-negative mutations reported; FANCB is X-linked and hemizygous loss in males causes disease.

Pathways

Fanconi anemia pathway (Reactome R-HSA-6783310)
DNA interstrand crosslink repair (KEGG hsa03460)
Homologous recombination (Reactome R-HSA-5693571)

Protein Summary

FANCB is a 95 kDa nuclear protein that forms a subcomplex with FAAP100 and FANCL, which is the E3 ubiquitin ligase module of the FA core complex. It is essential for the monoubiquitination of FANCD2 and FANCI. FANCB contains a putative nuclear localization signal and is required for the nuclear accumulation of the FA core complex. The protein is highly conserved in vertebrates and is expressed at low levels in most tissues, with highest expression in testis.

Related Products

Product name Cat.No. Species Gene ID
FANCB Knockout HEK293 Cell Line EDJ-KQ4577 Human 2187 Details Get a Quote
FANCB Knockout A-549 Cell Line EDJ-KQ27235 Human 2187 Details Get a Quote
FANCB Knockout HCT 116 Cell Line EDJ-KQ27236 Human 2187 Details Get a Quote
FANCB Knockout HeLa Cell Line EDJ-KQ27237 Human 2187 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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