F7 Gene (Coagulation Factor VII)

Key regulator of the extrinsic coagulation pathway

Gene Information Card

Symbol F7
Full Name Coagulation factor VII
Gene Type protein-coding
Chromosomal Location 13q34
NCBI Gene ID 2155 ncbi.nlm.nih.gov/gene/2155
Ensembl ID ENSG00000057593
UniProt ID P08709
OMIM ID 227500
HGNC ID 3544
Aliases FVII, SPCA, proconvertin

Description

The F7 gene encodes coagulation factor VII, a vitamin K-dependent serine protease that initiates the extrinsic coagulation cascade. Factor VII circulates as a zymogen and is activated to factor VIIa by thrombin, factor Xa, or factor IXa. The activated form binds to tissue factor (TF) to form a complex that activates factor X and factor IX, leading to thrombin generation and fibrin clot formation. Mutations in F7 cause factor VII deficiency, a rare autosomal recessive bleeding disorder, and polymorphisms influence warfarin sensitivity and thrombotic risk.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Factor VII deficiency Loss-of-function mutations reduce or abolish factor VII activity, impairing extrinsic coagulation and causing bleeding tendency. ClinVar, OMIM
Warfarin sensitivity Polymorphisms (e.g., -323 ins10) alter F7 expression, affecting warfarin dose requirements. NCBI, ClinVar
Thrombosis risk Elevated factor VII levels (e.g., due to promoter polymorphisms) increase risk of venous thromboembolism. OMIM, NCBI

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 58.3 High
Plasma N/A Secreted
Kidney 1.2 Low
Lung 0.8 Low
Cell Line Expression
Cell Line nTPM Notes
HepG2 62.1 Hepatocyte-derived line, high expression
HEK293 0.5 Low expression
K562 0.2 Very low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1151G>A (p.Arg304Gln) Missense Common Reduced activity, mild deficiency
c.1098G>A (p.Arg247His) Missense Rare Severe deficiency
c.681+1G>T Splice site Rare Null allele, severe deficiency
-323 ins10 Promoter insertion Polymorphic Reduced expression, warfarin sensitivity
Mutation functional classification

Loss of Function (LOF)

Most F7 mutations cause loss of function, leading to factor VII deficiency with reduced coagulant activity.

Gain of Function (GOF)

Rare gain-of-function variants (e.g., p.Arg304Gln in some contexts) may increase activity, but are not well characterized.

Dominant Negative (DN)

No dominant-negative mutations reported; deficiency is autosomal recessive.

Gene Ontology (GO)

• serine-type endopeptidase activity • calcium ion binding
• blood coagulation • extrinsic pathway
• proteolysis • extracellular space

Pathways

Extrinsic coagulation pathway (Reactome: R-HSA-140837)
Vitamin K metabolism (Reactome: R-HSA-6803544)
Formation of fibrin clot (Reactome: R-HSA-140877)

Protein Summary

Coagulation factor VII is a 50 kDa vitamin K-dependent glycoprotein synthesized in the liver and secreted into plasma. It consists of an N-terminal Gla domain, two epidermal growth factor-like domains, and a C-terminal serine protease domain. Upon binding to tissue factor at sites of vascular injury, factor VIIa initiates the coagulation cascade by activating factor X and factor IX. The protein is essential for hemostasis; deficiency leads to bleeding diathesis, while elevated levels are associated with thrombosis.

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Displaying Records 1 To 15 Of 484 Records
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