F7 Gene (Coagulation Factor VII)
Key regulator of the extrinsic coagulation pathway
Gene Information Card
| Symbol | F7 |
|---|---|
| Full Name | Coagulation factor VII |
| Gene Type | protein-coding |
| Chromosomal Location | 13q34 |
| NCBI Gene ID | 2155 ncbi.nlm.nih.gov/gene/2155 |
| Ensembl ID | ENSG00000057593 |
| UniProt ID | P08709 |
| OMIM ID | 227500 |
| HGNC ID | 3544 |
| Aliases | FVII, SPCA, proconvertin |
Description
The F7 gene encodes coagulation factor VII, a vitamin K-dependent serine protease that initiates the extrinsic coagulation cascade. Factor VII circulates as a zymogen and is activated to factor VIIa by thrombin, factor Xa, or factor IXa. The activated form binds to tissue factor (TF) to form a complex that activates factor X and factor IX, leading to thrombin generation and fibrin clot formation. Mutations in F7 cause factor VII deficiency, a rare autosomal recessive bleeding disorder, and polymorphisms influence warfarin sensitivity and thrombotic risk.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Factor VII deficiency | Loss-of-function mutations reduce or abolish factor VII activity, impairing extrinsic coagulation and causing bleeding tendency. | ClinVar, OMIM |
| Warfarin sensitivity | Polymorphisms (e.g., -323 ins10) alter F7 expression, affecting warfarin dose requirements. | NCBI, ClinVar |
| Thrombosis risk | Elevated factor VII levels (e.g., due to promoter polymorphisms) increase risk of venous thromboembolism. | OMIM, NCBI |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 58.3 | High |
| Plasma | N/A | Secreted |
| Kidney | 1.2 | Low |
| Lung | 0.8 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 62.1 | Hepatocyte-derived line, high expression |
| HEK293 | 0.5 | Low expression |
| K562 | 0.2 | Very low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1151G>A (p.Arg304Gln) | Missense | Common | Reduced activity, mild deficiency |
| c.1098G>A (p.Arg247His) | Missense | Rare | Severe deficiency |
| c.681+1G>T | Splice site | Rare | Null allele, severe deficiency |
| -323 ins10 | Promoter insertion | Polymorphic | Reduced expression, warfarin sensitivity |
Mutation functional classification
Loss of Function (LOF)
Most F7 mutations cause loss of function, leading to factor VII deficiency with reduced coagulant activity.
Gain of Function (GOF)
Rare gain-of-function variants (e.g., p.Arg304Gln in some contexts) may increase activity, but are not well characterized.
Dominant Negative (DN)
No dominant-negative mutations reported; deficiency is autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
| • serine-type endopeptidase activity | • calcium ion binding |
| • blood coagulation | • extrinsic pathway |
| • proteolysis | • extracellular space |
Pathways
• Extrinsic coagulation pathway (Reactome: R-HSA-140837)
• Vitamin K metabolism (Reactome: R-HSA-6803544)
• Formation of fibrin clot (Reactome: R-HSA-140877)
Protein Summary
Coagulation factor VII is a 50 kDa vitamin K-dependent glycoprotein synthesized in the liver and secreted into plasma. It consists of an N-terminal Gla domain, two epidermal growth factor-like domains, and a C-terminal serine protease domain. Upon binding to tissue factor at sites of vascular injury, factor VIIa initiates the coagulation cascade by activating factor X and factor IX. The protein is essential for hemostasis; deficiency leads to bleeding diathesis, while elevated levels are associated with thrombosis.
Related Services
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| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| TCF7 Knockout HEK293 Cell Line | EDJ-KQ338 | Human | 6932 | Details Get a Quote |
| TCF7L1 Knockout HEK293 Cell Line | EDJ-KQ339 | Human | 83439 | Details Get a Quote |
| TCF7L2 Knockout HEK293 Cell Line | EDJ-KQ340 | Human | 6934 | Details Get a Quote |
| KIF7 Knockout HEK293 Cell Line | EDJ-KQ905 | Human | 374654 | Details Get a Quote |
| ZNF717 Knockout HEK293 Cell Line | EDJ-KQ966 | Human | 100131827 | Details Get a Quote |
| IRF7 Knockout HEK293 Cell Line | EDJ-KQ993 | Human | 3665 | Details Get a Quote |
| FGF7 Knockout HEK293 Cell Line | EDJ-KQ1195 | Human | 2252 | Details Get a Quote |
| GDF7 Knockout HEK293 Cell Line | EDJ-KQ1403 | Human | 151449 | Details Get a Quote |
| ZNF714 Knockout HEK293 Cell Line | EDJ-KQ2125 | Human | 148206 | Details Get a Quote |
| TRAF7 Knockout HEK293 Cell Line | EDJ-KQ3267 | Human | 84231 | Details Get a Quote |
| F7 Knockout HEK293 Cell Line | EDJ-KQ3898 | Human | 2155 | Details Get a Quote |
| ZNF79 Knockout HEK293 Cell Line | EDJ-KQ5344 | Human | 7633 | Details Get a Quote |
| C8orf74 Knockout HEK293 Cell Line | EDJ-KQ5415 | Human | 203076 | Details Get a Quote |
| C9orf72 Knockout HEK293 Cell Line | EDJ-KQ5467 | Human | 203228 | Details Get a Quote |
| RNF7 Knockout HEK293 Cell Line | EDJ-KQ6006 | Human | 9616 | Details Get a Quote |
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