F12 (Coagulation Factor XII)

Hageman Factor – Key Initiator of the Contact Activation System

Gene Information Card

Symbol F12
Full Name Coagulation Factor XII
Gene Type Protein coding
Chromosomal Location 5q35.3
NCBI Gene ID 2161 ncbi.nlm.nih.gov/gene/2161
Ensembl ID ENSG00000131187
UniProt ID P00748
OMIM ID 610619
HGNC ID 3530
Aliases HAF, HAE3, HAF, FXII

Description

The F12 gene encodes coagulation factor XII (FXII, Hageman factor), a serine protease zymogen that initiates the intrinsic pathway of coagulation and the contact activation system. FXII is activated upon contact with negatively charged surfaces, leading to activation of factor XI and prekallikrein, and triggering bradykinin production. The gene is located on chromosome 5q35.3 and spans approximately 12 kb. Mutations in F12 are associated with hereditary angioedema type III (HAE3) and FXII deficiency (Hageman trait).

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Hereditary angioedema type III Gain-of-function mutations (e.g., p.Thr328Lys, p.Thr328Arg) increase bradykinin production via enhanced kallikrein activation ClinVar, OMIM
Factor XII deficiency (Hageman trait) Loss-of-function mutations lead to reduced FXII activity; prolonged aPTT but generally no bleeding diathesis ClinVar, OMIM
Thrombosis risk Elevated FXII levels or specific variants may contribute to venous thromboembolism risk NCBI, OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 12.5 High
Kidney 1.2 Low
Lung 0.8 Low
Heart 0.5 Not detected
Brain 0.3 Not detected
Cell Line Expression
Cell Line nTPM Notes
HepG2 15.3 Hepatocyte cell line; high expression
Huh-7 10.1 Hepatocyte cell line; moderate expression
HEK293 0.2 Very low expression
K562 0.1 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.983C>A (p.Thr328Lys) Missense Rare Gain-of-function; associated with HAE3
c.983C>G (p.Thr328Arg) Missense Rare Gain-of-function; associated with HAE3
c.1681C>T (p.Arg561*) Nonsense Very rare Loss-of-function; causes FXII deficiency
c.1361G>A (p.Trp454*) Nonsense Very rare Loss-of-function; causes FXII deficiency
Mutation functional classification

Loss of Function (LOF)

Nonsense and frameshift mutations leading to truncated or absent FXII protein; associated with Hageman trait (FXII deficiency) with prolonged aPTT but no bleeding.

Gain of Function (GOF)

Missense mutations at Thr328 (e.g., p.Thr328Lys, p.Thr328Arg) enhance FXII activation and bradykinin production, causing hereditary angioedema type III.

Dominant Negative (DN)

No well-characterized dominant-negative mutations reported for F12.

Pathways

Intrinsic pathway of coagulation (Reactome: R-HSA-140837)
Contact activation system (Reactome: R-HSA-166658)
Kallikrein-kinin system (Reactome: R-HSA-166662)

Protein Summary

Coagulation factor XII (FXII) is a 596-amino-acid glycoprotein synthesized primarily in the liver and secreted into plasma as a zymogen. It contains an N-terminal fibronectin type II domain, two EGF-like domains, a kringle domain, a proline-rich region, and a C-terminal trypsin-like serine protease domain. Upon contact with anionic surfaces (e.g., glass, kaolin, polyphosphates), FXII undergoes autoactivation to FXIIa, which then activates factor XI and prekallikrein. FXIIa also cleaves high-molecular-weight kininogen to release bradykinin, a potent vasodilator. The protein is essential for the contact activation pathway but not for hemostasis in vivo; deficiency does not cause bleeding.

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Displaying Records 1 To 15 Of 126 Records
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