DNAJA3: A Key Regulator of Mitochondrial Apoptosis and Cellular Stress

Comprehensive genomic and proteomic overview of the DnaJ heat shock protein family member A3 gene

Gene Information Card

Symbol DNAJA3
Full Name DnaJ heat shock protein family (Hsp40) member A3
Gene Type Protein coding
Chromosomal Location 16p13.3
NCBI Gene ID 9093 ncbi.nlm.nih.gov/gene/9093
Ensembl ID ENSG00000103423
UniProt ID Q96EY1
OMIM ID 608382
HGNC ID 11873
Aliases Tid1, hTid-1, HCA3

Description

DNAJA3 encodes a member of the DnaJ/Hsp40 family of co-chaperones, localized primarily to mitochondria. The protein interacts with Hsp70 chaperones to regulate protein folding, mitochondrial import, and apoptosis. It acts as a tumor suppressor by modulating p53 and NF-κB signaling, and its loss is implicated in cancer and neurodegenerative disorders.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Breast cancer Loss of DNAJA3 reduces p53-mediated apoptosis, promoting cell survival PMID: 19029910; COSMIC
Lung cancer Downregulation of DNAJA3 correlates with poor prognosis and increased metastasis PMID: 21804532; NCBI Gene
Huntington disease DNAJA3 interacts with mutant huntingtin, modulating mitochondrial dysfunction PMID: 20080796; UniProt
Colorectal cancer Reduced DNAJA3 expression linked to chemoresistance via NF-κB activation PMID: 23361061; ClinVar

Expression Profile

Tissue Expression
Tissue nTPM level
Heart 12.5 Medium
Liver 10.2 Medium
Brain 8.9 Medium
Skeletal muscle 7.6 Low
Kidney 6.4 Low
Cell Line Expression
Cell Line nTPM Notes
HeLa 14.3 Cervical cancer cell line
HepG2 11.8 Hepatocellular carcinoma
A549 9.5 Lung adenocarcinoma
MCF7 8.1 Breast cancer cell line
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.487C>T (p.Arg163Trp) Missense 0.01% (gnomAD) Reduced chaperone activity; associated with altered apoptosis
c.112G>A (p.Gly38Ser) Missense 0.005% Impaired mitochondrial localization
c.742_743insA Frameshift <0.001% Loss of function; truncation
Mutation functional classification

Loss of Function (LOF)

Frameshift and nonsense mutations that truncate the J-domain or C-terminal region, impairing Hsp70 interaction and mitochondrial import.

Gain of Function (GOF)

Not reported in literature or curated databases.

Dominant Negative (DN)

Missense mutations in the J-domain (e.g., p.Arg163Trp) may interfere with wild-type DNAJA3 function by competing for Hsp70 binding.

Gene Ontology (GO)

• Mitochondrion • Protein folding
• Chaperone cofactor-dependent protein refolding • Apoptotic process
• ATP binding • Heat shock protein binding
• Negative regulation of NF-κB transcription factor activity • Positive regulation of p53 class mediator

Pathways

p53 signaling pathway (KEGG: hsa04115)
Apoptosis (KEGG: hsa04210)
Protein processing in endoplasmic reticulum (KEGG: hsa04141)
Hsp70 chaperone cycle (Reactome: R-HSA-3371568)

Protein Summary

DNAJA3 (Tid1) is a 480-amino-acid mitochondrial co-chaperone containing a conserved J-domain that stimulates Hsp70 ATPase activity. It exists in two splice isoforms (long and short) and regulates apoptosis by modulating p53 stability and NF-κB signaling. The protein is ubiquitously expressed with highest levels in heart and liver. Loss of DNAJA3 promotes tumorigenesis and chemoresistance, while mutations in its J-domain impair its pro-apoptotic function.

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