CLDN15 Gene - Claudin 15
Tight junction protein involved in paracellular ion transport and gastrointestinal function
Gene Information Card
| Symbol | CLDN15 |
|---|---|
| Full Name | Claudin 15 |
| Gene Type | Protein coding |
| Chromosomal Location | 7q22.1 |
| NCBI Gene ID | 24146 ncbi.nlm.nih.gov/gene/24146 |
| Ensembl ID | ENSG00000106462 |
| UniProt ID | P56746 |
| OMIM ID | 615792 |
| HGNC ID | 2059 |
| Aliases | CLDN15, claudin-15 |
Description
CLDN15 (Claudin 15) is a protein-coding gene that belongs to the claudin family of tight junction proteins. Claudins are integral membrane proteins that form the backbone of tight junction strands, regulating paracellular ion permeability. CLDN15 is specifically involved in the selective permeability of cations, particularly sodium and potassium, in epithelial tissues. It plays a critical role in gastrointestinal tract function, including intestinal ion absorption and barrier maintenance. The gene is located on chromosome 7q22.1 and encodes a 228-amino acid protein with four transmembrane domains.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Inflammatory Bowel Disease (IBD) | Altered tight junction integrity and paracellular permeability due to CLDN15 dysregulation | NCBI Gene, PubMed |
| Colorectal Cancer | Downregulation of CLDN15 expression associated with tumor progression and metastasis | COSMIC, PubMed |
| Gastric Cancer | Reduced CLDN15 expression linked to poor prognosis and increased invasion | COSMIC, PubMed |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Small intestine | 45.2 | High |
| Colon | 38.1 | High |
| Stomach | 12.5 | Medium |
| Kidney | 8.3 | Medium |
| Liver | 2.1 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| Caco-2 | 52.0 | Colorectal adenocarcinoma, high expression |
| HT-29 | 41.3 | Colorectal adenocarcinoma, moderate expression |
| HCT 116 | 35.7 | Colorectal carcinoma, moderate expression |
| MCF7 | 1.2 | Breast cancer, low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.200C>T (p.Pro67Leu) | Missense | <0.01% | Potential alteration in tight junction assembly |
| c.340G>A (p.Val114Met) | Missense | <0.01% | Unknown functional impact |
| c.456_457insA | Frameshift | <0.01% | Predicted loss of function |
Mutation functional classification
Loss of Function (LOF)
Frameshift mutations (e.g., c.456_457insA) are predicted to cause loss of function by truncating the protein, disrupting tight junction integrity.
Gain of Function (GOF)
No gain-of-function mutations have been reported for CLDN15.
Dominant Negative (DN)
No dominant-negative mutations have been characterized for CLDN15.
View complete mutation data:
Gene Ontology (GO)
| • bicellular tight junction (GO:0005923) | • chloride channel activity (GO:0005254) |
| • lateral plasma membrane (GO:0016328) | • cell junction (GO:0030054) |
| • divalent metal ion transport (GO:0070838) |
Pathways
• Tight junction pathway (KEGG: hsa04530)
• Cell junction organization (Reactome: R-HSA-446728)
Protein Summary
Claudin-15 is a 228-amino acid transmembrane protein with four membrane-spanning domains, two extracellular loops, and intracellular N- and C-termini. It localizes to tight junctions in epithelial cells, where it forms paracellular pores selective for cations, particularly Na+ and K+. The protein is essential for maintaining ion homeostasis in the gastrointestinal tract, especially in the small intestine and colon. Dysregulation of claudin-15 expression is associated with inflammatory bowel disease and colorectal cancer.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| CLDN15 Knockout HEK293 Cell Line | EDJ-KQ7473 | Human | 24146 | Details Get a Quote |
| CLDN15 Knockout A-549 Cell Line | EDJ-KQ34035 | Human | 24146 | Details Get a Quote |
| CLDN15 Knockout HCT 116 Cell Line | EDJ-KQ34037 | Human | 24146 | Details Get a Quote |
| CLDN15 Knockout HeLa Cell Line | EDJ-KQ34038 | Human | 24146 | Details Get a Quote |
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