CHM
CHM Gene (Rab Escort Protein 1) - Choroideremia
Gene Information Card
| Symbol | CHM |
|---|---|
| Full Name | CHM (Rab escort protein 1) |
| Gene Type | Protein coding |
| Chromosomal Location | Xq21.2 |
| NCBI Gene ID | 1121 ncbi.nlm.nih.gov/gene/1121 |
| Ensembl ID | ENSG00000188419 |
| UniProt ID | P24386 |
| OMIM ID | 303100 |
| HGNC ID | 1940 |
| Aliases | REP1, TCD, GGAB, DXS540, DXS1101 |
Description
The CHM gene (Xq21.2) encodes Rab escort protein 1 (REP1), a component of the Rab geranylgeranyltransferase complex. REP1 binds newly synthesized Rab proteins and presents them to the catalytic RabGGTase subunit for prenylation, a lipid modification essential for Rab membrane targeting and vesicular trafficking. Loss-of-function mutations in CHM cause choroideremia, an X-linked progressive degeneration of the choroid, retinal pigment epithelium, and retina, leading to blindness. REP1 deficiency disrupts Rab27a prenylation and vesicle transport in retinal cells.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Choroideremia | Loss of REP1 function impairs Rab prenylation, disrupting vesicular trafficking in retinal pigment epithelium and choroid, leading to progressive degeneration. | ClinVar, OMIM #303100 |
| Retinitis pigmentosa (X-linked, rare) | Some CHM mutations may present with retinitis pigmentosa-like phenotype due to overlapping retinal degeneration mechanisms. | ClinVar, OMIM |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Retina | 12.5 | High |
| Testis | 8.3 | Medium |
| Brain (cerebellum) | 6.1 | Medium |
| Heart | 4.7 | Low |
| Liver | 3.2 | Low |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| ARPE-19 (retinal pigment epithelium) | 15.2 | High expression relevant to retinal function |
| HeLa | 7.8 | Medium |
| HEK293 | 6.5 | Medium |
| K562 | 4.1 | Low |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.940C>T (p.Arg314*) | Nonsense | ~15% of choroideremia cases | Loss of function; premature termination, nonsense-mediated decay |
| c.499C>T (p.Arg167*) | Nonsense | ~10% of choroideremia cases | Loss of function; truncated protein |
| c.757+1G>A | Splice site | ~5% of choroideremia cases | Loss of function; exon skipping, frameshift |
| c.1342delG (p.Glu448Argfs*3) | Frameshift deletion | Rare | Loss of function; truncated protein |
Mutation functional classification
Loss of Function (LOF)
Majority of CHM mutations are loss-of-function (nonsense, frameshift, splice site), leading to REP1 deficiency and impaired Rab prenylation.
Gain of Function (GOF)
No gain-of-function mutations reported.
Dominant Negative (DN)
No dominant-negative mutations reported; CHM is X-linked recessive.
View complete mutation data:
Gene Ontology (GO)
| • Rab GTPase binding (GO:0017137) | • Rab geranylgeranyltransferase activity (GO:0004663) |
| • Protein prenylation (GO:0018344) | • Intracellular protein transport (GO:0006886) |
| • Vesicle-mediated transport (GO:0016192) |
Pathways
• Rab geranylgeranylation (Reactome R-HSA-8873719)
• Vesicle-mediated transport (Reactome R-HSA-5653656)
• Membrane trafficking (Reactome R-HSA-199991)
Protein Summary
Rab escort protein 1 (REP1) is a 653-amino acid protein (UniProt P24386) that forms a complex with RabGGTase to catalyze the geranylgeranylation of Rab GTPases. REP1 binds newly synthesized Rab proteins, presents them to the catalytic subunit, and then delivers the prenylated Rab to the target membrane. REP1 is ubiquitously expressed but particularly critical in retinal pigment epithelium and choroid, where Rab27a-mediated melanosome transport is essential for photoreceptor survival. Loss of REP1 leads to accumulation of unprenylated Rab proteins and disrupted vesicular trafficking, causing choroideremia.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| CHMP4C Knockout HEK293 Cell Line | EDJ-KQ3500 | Human | 92421 | Details Get a Quote |
| CHML Knockout HEK293 Cell Line | EDJ-KQ3573 | Human | 1122 | Details Get a Quote |
| CHM Knockout HEK293 Cell Line | EDJ-KQ4266 | Human | 1121 | Details Get a Quote |
| CHMP1A Knockout HEK293 Cell Line | EDJ-KQ5420 | Human | 5119 | Details Get a Quote |
| CHMP2B Knockout HEK293 Cell Line | EDJ-KQ8333 | Human | 25978 | Details Get a Quote |
| CHMP7 Knockout HEK293 Cell Line | EDJ-KQ10065 | Human | 91782 | Details Get a Quote |
| CHMP5 Knockout HEK293 Cell Line | EDJ-KQ11122 | Human | 51510 | Details Get a Quote |
| CHMP1B Knockout HEK293 Cell Line | EDJ-KQ12160 | Human | 57132 | Details Get a Quote |
| CHMP2B Knockout HeLa Cell Line | EDJ-KQ33010 | Human | 25978 | Details Get a Quote |
| CHMP5 Knockout HCT 116 Cell Line | EDJ-KQ39102 | Human | 51510 | Details Get a Quote |
| CHMP5 Knockout HeLa Cell Line | EDJ-KQ39103 | Human | 51510 | Details Get a Quote |
| CHMP1B Knockout A-549 Cell Line | EDJ-KQ42109 | Human | 57132 | Details Get a Quote |
| CHMP1B Knockout HCT 116 Cell Line | EDJ-KQ42110 | Human | 57132 | Details Get a Quote |
| CHMP1B Knockout HeLa Cell Line | EDJ-KQ42111 | Human | 57132 | Details Get a Quote |
| CHMP4C Knockout A-549 Cell Line | EDJ-KQ25304 | Human | 92421 | Details Get a Quote |
Displaying Records 1 To 15 Of 42 Records
- 1
- 2
- Next Page »