CDK5

Cyclin Dependent Kinase 5: A Key Regulator of Neuronal Development and Function

Gene Information Card

Symbol CDK5
Full Name Cyclin Dependent Kinase 5
Gene Type Protein coding
Chromosomal Location 7q36.1
NCBI Gene ID 1020 ncbi.nlm.nih.gov/gene/1020
Ensembl ID ENSG00000164885
UniProt ID Q00535
OMIM ID 123831
HGNC ID 1774
Aliases PSSALRE, LIS7, CDKN5

Description

CDK5 (Cyclin Dependent Kinase 5) is a serine/threonine protein kinase that is predominantly active in post-mitotic neurons. Unlike typical cyclin-dependent kinases, CDK5 activity is regulated by its neuron-specific activators p35 (CDK5R1) and p39 (CDK5R2). CDK5 plays essential roles in neuronal migration, synaptic plasticity, and cytoskeletal dynamics. Dysregulation of CDK5 is implicated in neurodegenerative disorders such as Alzheimer disease and in various cancers.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Alzheimer Disease CDK5 hyperactivation leads to aberrant tau phosphorylation, contributing to neurofibrillary tangle formation. PMID: 15378065, NCBI Gene
Lissencephaly 7 (LIS7) Homozygous loss-of-function mutations in CDK5 disrupt neuronal migration during cortical development. OMIM #616342
Pancreatic Cancer CDK5 overexpression promotes cell proliferation and invasion via STAT3 signaling. COSMIC, PMID: 25605247
Non-Small Cell Lung Cancer CDK5 upregulation correlates with poor prognosis and enhances tumor growth. COSMIC, PMID: 29533785

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 24.5 High
Adrenal Gland 6.2 Medium
Testis 4.8 Medium
Lung 2.1 Low
Liver 1.3 Low
Cell Line Expression
Cell Line nTPM Notes
SH-SY5Y (neuroblastoma) 18.7 Neuronal model, high CDK5 activity
HeLa (cervical carcinoma) 5.4 Moderate expression
A549 (lung carcinoma) 3.2 Low expression
MCF7 (breast carcinoma) 2.8 Low expression
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.457C>T (p.Arg153Trp) Missense Rare Loss of kinase activity; associated with lissencephaly 7 (ClinVar)
c.589G>A (p.Gly197Arg) Missense Rare Reduced binding to p35; impaired neuronal migration (ClinVar)
c.1A>G (p.Met1Val) Start loss Rare Complete loss of protein; severe neurodevelopmental phenotype (ClinVar)
Mutation functional classification

Loss of Function (LOF)

Missense and start-loss mutations (e.g., p.Arg153Trp, p.Met1Val) reduce or abolish kinase activity, leading to lissencephaly and developmental delay.

Gain of Function (GOF)

Not well characterized; overexpression in cancers may confer gain-of-function via enhanced phosphorylation of oncogenic substrates.

Dominant Negative (DN)

Not reported for CDK5.

Pathways

Alzheimer disease - tau pathology (KEGG: hsa05010)
Neurotrophin signaling pathway (KEGG: hsa04722)
p35/CDK5 pathway (Reactome: R-HSA-8862803)
Axon guidance (KEGG: hsa04360)

Protein Summary

CDK5 is a 292-amino acid protein (33 kDa) belonging to the CMGC family of serine/threonine kinases. It shares high sequence homology with CDK1 and CDK2 but is unique in its requirement for non-cyclin activators p35 or p39. The protein structure includes a typical kinase domain with an N-terminal lobe and C-terminal lobe. CDK5 phosphorylates numerous substrates including tau, MAP1B, and DARPP32, regulating cytoskeletal dynamics, synaptic function, and cell survival. In the absence of its activator, CDK5 is catalytically inactive.

Related Products

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CDK5RAP3 Knockout HEK293 Cell Line EDJ-KQ1911 Human 80279 Details Get a Quote
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CDK5RAP1 Knockout HeLa Cell Line EDJ-KQ39211 Human 51654 Details Get a Quote
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CDK5RAP2 Knockout HeLa Cell Line EDJ-KQ41994 Human 55755 Details Get a Quote
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CDK5R1 Knockout A-549 Cell Line EDJ-KQ30386 Human 8851 Details Get a Quote
Displaying Records 1 To 15 Of 24 Records
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