BRINP3 (BMP/Retinoic Acid Inducible Neural Specific 3)
A gene encoding a protein involved in neural development and cell cycle regulation, with implications in cancer and neurological disorders.
Gene Information Card
| Symbol | BRINP3 |
|---|---|
| Full Name | BMP/Retinoic Acid Inducible Neural Specific 3 |
| Gene Type | Protein coding |
| Chromosomal Location | 1q31.1 |
| NCBI Gene ID | 27121 ncbi.nlm.nih.gov/gene/27121 |
| Ensembl ID | ENSG00000143190 |
| UniProt ID | Q76MJ5 |
| OMIM ID | 613220 |
| HGNC ID | 20291 |
| Aliases | DBCCR1L, FAM5C, BRINP3 |
Description
BRINP3 (BMP/Retinoic Acid Inducible Neural Specific 3) is a protein-coding gene located on chromosome 1q31.1. It encodes a member of the BRINP family, which is characterized by a conserved N-terminal domain and is involved in neural development, cell cycle regulation, and apoptosis. The gene is induced by BMP and retinoic acid signaling and is expressed predominantly in the brain. BRINP3 has been implicated in various cancers, including colorectal and lung cancer, where it may act as a tumor suppressor or oncogene depending on context. Mutations and altered expression of BRINP3 are associated with neurological disorders and cancer progression.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Colorectal Cancer | Downregulation of BRINP3 may promote tumor growth through loss of cell cycle control; hypermethylation of the promoter region is observed. | NCBI Gene, COSMIC |
| Lung Cancer | Altered expression levels; potential role in tumor suppression or oncogenesis via BMP signaling pathway. | NCBI Gene, COSMIC |
| Neurological Disorders | Involved in neural development; mutations or dysregulation may contribute to conditions such as autism or intellectual disability. | OMIM, NCBI Gene |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Brain | 12.5 | Medium |
| Testis | 5.2 | Low |
| Lung | 3.1 | Low |
| Colon | 2.8 | Low |
| Heart | 1.5 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| SH-SY5Y (neuroblastoma) | 15.0 | High expression; relevant for neural studies |
| A549 (lung carcinoma) | 4.5 | Moderate expression |
| HCT116 (colorectal carcinoma) | 3.2 | Low expression |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.1015C>T (p.Arg339Ter) | Nonsense | <0.1% | Loss of function; truncated protein |
| c.742G>A (p.Gly248Arg) | Missense | <0.1% | Unknown; predicted damaging |
| c.1234_1235insA | Frameshift | <0.1% | Loss of function |
Mutation functional classification
Loss of Function (LOF)
Nonsense and frameshift mutations lead to premature stop codons, resulting in truncated, non-functional protein.
Gain of Function (GOF)
No gain-of-function mutations reported.
Dominant Negative (DN)
No dominant-negative mutations reported.
View complete mutation data:
Gene Ontology (GO)
| • protein binding (GO:0005515) | • nucleus (GO:0005634) |
| • cytoplasm (GO:0005737) | • regulation of neuron differentiation (GO:0045664) |
| • cell population proliferation (GO:0008283) |
Pathways
• BMP signaling pathway
• Retinoic acid signaling pathway
• Cell cycle regulation
Protein Summary
The BRINP3 protein is a 746-amino acid polypeptide with a molecular weight of approximately 83 kDa. It contains a conserved N-terminal domain (BRINP domain) and is localized to the nucleus and cytoplasm. The protein is involved in regulating cell cycle progression, apoptosis, and neural differentiation. It interacts with other proteins to modulate BMP and retinoic acid signaling, which are critical for development and tissue homeostasis. Structural predictions suggest multiple phosphorylation sites, indicating potential regulation by kinases.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| BRINP3 Knockout HEK293 Cell Line | EDJ-KQ12568 | Human | 339479 | Details Get a Quote |
| BRINP3 Knockout HeLa Cell Line | EDJ-KQ59643 | Human | 339479 | Details Get a Quote |
| BRINP3 Knockout A-549 Cell Line | EDJ-KQ68112 | Human | 339479 | Details Get a Quote |
| BRINP3 Knockout HCT 116 Cell Line | EDJ-KQ76488 | Human | 339479 | Details Get a Quote |
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