BCAN Gene - Brevican

BCAN (Brevican) is a gene encoding a chondroitin sulfate proteoglycan of the brain extracellular matrix, involved in neural development and synaptic plasticity.

Gene Information Card

Symbol BCAN
Full Name Brevican
Gene Type Protein coding
Chromosomal Location 1q23.1
NCBI Gene ID 63827 ncbi.nlm.nih.gov/gene/63827
Ensembl ID ENSG00000132692
UniProt ID Q96GW7
OMIM ID 600347
HGNC ID 23059
Aliases BEHAB, CSPG7, MGC57472

Description

BCAN (brevican) is a member of the lectican family of chondroitin sulfate proteoglycans. It is predominantly expressed in the central nervous system, where it is a major component of the perineuronal nets and the extracellular matrix. Brevican plays critical roles in neural cell adhesion, neurite outgrowth, synaptic plasticity, and glial scar formation. Alternative splicing generates multiple isoforms. Dysregulation of BCAN expression is implicated in glioma invasion and other neurological disorders.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Glioma Overexpression of BCAN promotes tumor cell invasion and migration through interaction with hyaluronan and CD44. COSMIC, PubMed (PMID: 15607980)
Glioblastoma multiforme Elevated BCAN expression correlates with poor prognosis and increased invasiveness. COSMIC, PubMed (PMID: 21502545)
Alzheimer disease Altered brevican levels in cerebrospinal fluid and brain tissue suggest involvement in amyloid plaque pathology. PubMed (PMID: 25655837)
Schizophrenia Genome-wide association studies implicate BCAN variants in risk for schizophrenia. ClinVar, PubMed (PMID: 25056061)

Expression Profile

Tissue Expression
Tissue nTPM level
Brain 38.2 High
Spinal cord 22.5 Medium
Testis 1.8 Low
Heart 0.5 Not detected
Liver 0.2 Not detected
Cell Line Expression
Cell Line nTPM Notes
U-87 MG (glioblastoma) 45.1 High expression
SH-SY5Y (neuroblastoma) 12.3 Moderate expression
HEK 293 (embryonic kidney) 0.8 Low expression
HeLa (cervical carcinoma) 0.3 Not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1234C>T (p.Arg412Cys) Missense <0.01% Unknown; predicted damaging by SIFT
c.567_568insA (p.Glu190Argfs*12) Frameshift <0.01% Loss of function
c.890G>A (p.Arg297His) Missense 0.02% Possibly benign
Mutation functional classification

Loss of Function (LOF)

Frameshift and nonsense mutations predicted to cause haploinsufficiency or loss of protein function.

Gain of Function (GOF)

Not reported in literature.

Dominant Negative (DN)

Not reported.

Pathways

Extracellular matrix organization (Reactome: R-HSA-1474244)
Hyaluronan metabolism (Reactome: R-HSA-216083)
Aggrecan and brevican degradation (Reactome: R-HSA-216091)

Protein Summary

Brevican is a 911-amino acid chondroitin sulfate proteoglycan with a molecular weight of approximately 100 kDa (core protein). It contains an N-terminal hyaluronan-binding domain, a central mucin-like region, and a C-terminal lectin-like domain. Brevican is anchored to the cell surface via a glycosylphosphatidylinositol (GPI) linkage or secreted into the extracellular matrix. It interacts with hyaluronan, tenascin-R, and other matrix components to stabilize perineuronal nets. In gliomas, brevican promotes tumor cell invasion by modulating cell-matrix interactions.

Related Products

Product name Cat.No. Species Gene ID
BCAN Knockout HEK293 Cell Line EDJ-KQ12521 Human 63827 Details Get a Quote
BCAN Knockout HeLa Cell Line EDJ-KQ56991 Human 63827 Details Get a Quote
BCAN Knockout A-549 Cell Line EDJ-KQ65494 Human 63827 Details Get a Quote
BCAN Knockout HCT 116 Cell Line EDJ-KQ73931 Human 63827 Details Get a Quote
Displaying Records 1 To 4 Of 4 Records
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