BARD1 Gene: BRCA1-Associated RING Domain Protein 1

A critical tumor suppressor gene involved in DNA repair, cell cycle regulation, and hereditary cancer susceptibility.

Gene Information Card

Symbol BARD1
Full Name BRCA1-associated RING domain protein 1
Gene Type Protein coding
Chromosomal Location 2q35
NCBI Gene ID 580 ncbi.nlm.nih.gov/gene/580
Ensembl ID ENSG00000138376
UniProt ID Q99728
OMIM ID 601593
HGNC ID 952
Aliases BRCA1-associated RING domain protein 1; RING finger protein 65; RNF65

Description

The BARD1 gene encodes a protein that interacts with BRCA1 to form a heterodimeric complex essential for DNA double-strand break repair, homologous recombination, and cell cycle checkpoint control. BARD1 contains a RING finger domain, ankyrin repeats, and a BRCT domain, which are critical for its tumor suppressor functions. Germline mutations in BARD1 are associated with increased susceptibility to breast and ovarian cancers, and somatic alterations are observed in various tumor types.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Breast cancer Loss of function mutations in BARD1 impair homologous recombination repair, leading to genomic instability and tumorigenesis. ClinVar; OMIM; multiple case-control studies
Ovarian cancer BARD1 mutations disrupt BRCA1-BARD1 complex formation, compromising DNA repair and increasing cancer risk. ClinVar; OMIM; functional studies
Endometrial cancer Somatic BARD1 alterations may contribute to tumor progression through defective DNA damage response. COSMIC; literature
Neuroblastoma BARD1 variants have been implicated in neuroblastoma susceptibility, possibly through altered apoptosis regulation. OMIM; GWAS studies

Expression Profile

Tissue Expression
Tissue nTPM level
Breast 8.2 Low
Ovary 6.5 Low
Testis 12.3 Medium
Bone marrow 5.1 Low
Lung 4.8 Low
Cell Line Expression
Cell Line nTPM Notes
MCF7 (breast cancer) 7.5 Moderate expression
OVCAR3 (ovarian cancer) 6.0 Moderate expression
A549 (lung cancer) 4.2 Low expression
HEK293 (embryonic kidney) 9.8 High expression (transfected)
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1690C>T (p.Gln564Ter) Nonsense Rare (0.1% in general population) Truncated protein, loss of function, increased cancer risk
c.1315C>T (p.Arg439Trp) Missense Rare (0.05%) Impaired BRCA1 binding, reduced DNA repair activity
c.1921C>T (p.Arg641Ter) Nonsense Rare (0.02%) Premature stop codon, loss of function
c.1977C>A (p.Tyr659Ter) Nonsense Rare (0.01%) Loss of BRCT domain, defective DNA damage response
Mutation functional classification

Loss of Function (LOF)

Most BARD1 pathogenic mutations are loss-of-function, leading to truncated or unstable proteins that fail to interact with BRCA1 or localize to DNA damage sites, thereby impairing homologous recombination repair.

Gain of Function (GOF)

No clear gain-of-function mutations have been reported for BARD1; oncogenic activity is primarily associated with loss of tumor suppressor function.

Dominant Negative (DN)

Some missense mutations in the RING domain may exert dominant-negative effects by forming non-functional heterodimers with BRCA1, interfering with wild-type BARD1 activity.

Gene Ontology (GO)

• DNA repair • double-strand break repair
• homologous recombination • ubiquitin-protein transferase activity
• zinc ion binding • protein heterodimerization activity
• cell cycle checkpoint • apoptotic process
• regulation of transcription by RNA polymerase II

Pathways

Homologous recombination repair
BRCA1-BARD1 complex pathway
DNA damage response
Cell cycle checkpoint control
Ubiquitin-mediated proteolysis

Protein Summary

The BARD1 protein is a 777-amino acid polypeptide that forms a stable heterodimer with BRCA1 via its RING finger domain. This complex possesses E3 ubiquitin ligase activity, which is crucial for DNA damage signaling and repair. BARD1 also contains ankyrin repeats and a BRCT domain that mediate protein-protein interactions and contribute to its role in transcriptional regulation and apoptosis. Loss of BARD1 function leads to genomic instability and cancer predisposition.

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