ALDH5A1 Gene - Aldehyde Dehydrogenase 5 Family Member A1

Succinate Semialdehyde Dehydrogenase Deficiency (SSADH Deficiency) Gene

Gene Information Card

Symbol ALDH5A1
Full Name Aldehyde Dehydrogenase 5 Family Member A1
Gene Type Protein coding
Chromosomal Location 6p22.3
NCBI Gene ID 7915 ncbi.nlm.nih.gov/gene/7915
Ensembl ID ENSG00000112294
UniProt ID P51649
OMIM ID 610045
HGNC ID 408
Aliases SSADH, SSDH, ALDH5, ALDH5A1V1, ALDH5A1V2

Description

The ALDH5A1 gene encodes succinate semialdehyde dehydrogenase (SSADH), a mitochondrial enzyme that catalyzes the irreversible oxidation of succinate semialdehyde to succinate in the GABA degradation pathway. This enzyme is critical for neurotransmitter metabolism, preventing accumulation of neurotoxic metabolites such as gamma-hydroxybutyrate (GHB). Mutations in ALDH5A1 cause succinate semialdehyde dehydrogenase deficiency (SSADHD), also known as 4-hydroxybutyric aciduria, an autosomal recessive disorder characterized by developmental delay, hypotonia, seizures, and intellectual disability.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Succinate semialdehyde dehydrogenase deficiency (SSADHD) Loss-of-function mutations in ALDH5A1 impair conversion of succinate semialdehyde to succinate, leading to accumulation of GHB and GABA, causing neurotoxicity ClinVar, OMIM
4-Hydroxybutyric aciduria Deficient SSADH activity results in elevated 4-hydroxybutyric acid in urine, plasma, and CSF OMIM #271980
Autism spectrum disorder (associated) Rare ALDH5A1 variants may contribute to GABAergic dysfunction in ASD PubMed case reports
Epilepsy (secondary) GABA and GHB accumulation disrupts neuronal excitation-inhibition balance ClinVar

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 12.3 Medium
Brain 8.7 Medium
Kidney 6.5 Low
Heart 4.2 Low
Skeletal Muscle 3.1 Low
Cell Line Expression
Cell Line nTPM Notes
HepG2 14.5 Hepatocyte model
SH-SY5Y 9.8 Neuroblastoma
HEK293 7.2 Embryonic kidney
U87MG 6.1 Glioblastoma
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.1225C>T (p.Arg409Trp) Missense Unknown Loss of function; common in SSADHD
c.751C>T (p.Arg251*) Nonsense Unknown Premature truncation; loss of function
c.154G>A (p.Gly52Arg) Missense Unknown Reduced enzyme activity
c.1060C>T (p.Arg354Trp) Missense Unknown Impaired substrate binding
Mutation functional classification

Loss of Function (LOF)

Most ALDH5A1 mutations are loss-of-function, reducing or abolishing SSADH enzymatic activity, leading to SSADH deficiency.

Gain of Function (GOF)

No gain-of-function mutations reported.

Dominant Negative (DN)

No dominant-negative effects described; disease is autosomal recessive.

Gene Ontology (GO)

• GO:0004029 - aldehyde dehydrogenase (NAD+) activity • GO:0004777 - succinate-semialdehyde dehydrogenase (NAD+) activity
• GO:0005739 - mitochondrion • GO:0009450 - gamma-aminobutyric acid catabolic process
• GO:0009448 - gamma-aminobutyric acid metabolic process • GO:0055114 - oxidation-reduction process

Pathways

KEGG hsa00410: beta-Alanine metabolism
KEGG hsa00430: Taurine and hypotaurine metabolism
KEGG hsa00650: Butanoate metabolism
KEGG hsa04727: GABAergic synapse
Reactome R-HSA-888593: GABA synthesis
release
reuptake and degradation

Protein Summary

Succinate semialdehyde dehydrogenase (SSADH) is a homotetrameric mitochondrial enzyme of 535 amino acids (UniProt P51649). It catalyzes the NAD+-dependent oxidation of succinate semialdehyde to succinate, the final step of GABA degradation. The enzyme is expressed predominantly in liver and brain. Deficiency leads to accumulation of GHB and GABA, causing neurological symptoms. The protein contains a mitochondrial targeting sequence and a conserved aldehyde dehydrogenase domain.

Related Products

Product name Cat.No. Species Gene ID
ALDH5A1 Knockout HEK293 Cell Line EDJ-KQ2331 Human 7915 Details Get a Quote
ALDH5A1 Knockout A-549 Cell Line EDJ-KQ22731 Human 7915 Details Get a Quote
ALDH5A1 Knockout HCT 116 Cell Line EDJ-KQ22732 Human 7915 Details Get a Quote
ALDH5A1 Knockout HeLa Cell Line EDJ-KQ22733 Human 7915 Details Get a Quote
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