AGXT
Alanine–Glyoxylate Aminotransferase
Gene Information Card
| Symbol | AGXT |
|---|---|
| Full Name | Alanine–glyoxylate aminotransferase |
| Gene Type | Protein coding |
| Chromosomal Location | 2q37.3 |
| NCBI Gene ID | 189 ncbi.nlm.nih.gov/gene/189 |
| Ensembl ID | ENSG00000172482 |
| UniProt ID | P21549 |
| OMIM ID | 604285 |
| HGNC ID | 341 |
| Aliases | AGT, AGT1, SPAT, SPT, TLH6 |
Description
The AGXT gene encodes alanine–glyoxylate aminotransferase, a peroxisomal enzyme that catalyzes the transamination of glyoxylate to glycine using alanine as the amino donor. This reaction is critical for detoxifying glyoxylate and preventing its conversion to oxalate. Mutations in AGXT cause primary hyperoxaluria type 1 (PH1), a rare autosomal recessive disorder characterized by excessive oxalate production, leading to kidney stones, nephrocalcinosis, and end-stage renal disease.
Disease Associations
| Disease category | Pathophysiological mechanism | Genomic evidence |
|---|---|---|
| Primary hyperoxaluria type 1 (PH1) | Loss-of-function mutations in AGXT reduce or abolish alanine–glyoxylate aminotransferase activity, leading to glyoxylate accumulation and conversion to oxalate by lactate dehydrogenase. | ClinVar, OMIM |
| Oxalate nephropathy | Secondary to PH1; elevated oxalate levels cause calcium oxalate crystal deposition in renal tubules, resulting in progressive kidney damage. | ClinVar, OMIM |
Expression Profile
Tissue Expression
| Tissue | nTPM | level |
|---|---|---|
| Liver | 57.3 | High |
| Kidney | 2.1 | Low |
| Small intestine | 1.5 | Low |
| Pancreas | 0.8 | Not detected |
Cell Line Expression
| Cell Line | nTPM | Notes |
|---|---|---|
| HepG2 | 62.4 | Hepatocellular carcinoma cell line; high expression |
| HEK 293 | 0.3 | Embryonic kidney cells; very low expression |
| A549 | 0.1 | Lung carcinoma; not detected |
Data source:Human Protein Atlas(proteinatlas.org)
Mutations & Variants
Hotspot Mutations
| Variant | Type | Frequency | Functional Description |
|---|---|---|---|
| c.33_34insC (p.Leu12fs) | Frameshift insertion | ~20% in PH1 patients | Loss of function; premature truncation |
| c.346G>A (p.Gly116Arg) | Missense | ~30% in PH1 patients | Loss of function; impaired dimerization and peroxisomal targeting |
| c.731T>C (p.Ile244Thr) | Missense | ~10% in PH1 patients | Loss of function; reduced catalytic activity |
| c.121G>A (p.Gly41Arg) | Missense | ~5% in PH1 patients | Loss of function; protein misfolding |
Mutation functional classification
Loss of Function (LOF)
Most AGXT mutations are loss-of-function, leading to deficient alanine–glyoxylate aminotransferase activity and accumulation of glyoxylate, which is converted to oxalate.
Gain of Function (GOF)
No gain-of-function mutations have been reported for AGXT.
Dominant Negative (DN)
No dominant-negative effects have been described; PH1 is autosomal recessive.
View complete mutation data:
Gene Ontology (GO)
Pathways
• Glyoxylate and dicarboxylate metabolism (KEGG: hsa00630)
• Peroxisomal protein import (Reactome: R-HSA-9033241)
• Metabolism of amino acids and derivatives (Reactome: R-HSA-71291)
Protein Summary
Alanine–glyoxylate aminotransferase (AGT) is a 392-amino-acid homodimeric peroxisomal enzyme encoded by AGXT. It uses pyridoxal phosphate as a cofactor to catalyze the transamination of glyoxylate to glycine, preventing oxalate formation. AGT is primarily expressed in the liver. Mislocalization to mitochondria due to mutations (e.g., p.Gly170Arg) is a known pathogenic mechanism in PH1. The protein has two domains: an N-terminal peroxisomal targeting signal (PTS1) and a C-terminal catalytic domain.
Related Services
Related Products
| Product name | Cat.No. | Species | Gene ID | |
|---|---|---|---|---|
| AGXT Knockout HEK293 Cell Line | EDJ-KQ4027 | Human | 189 | Details Get a Quote |
| AGXT2 Knockout HEK293 Cell Line | EDJ-KQ12316 | Human | 64902 | Details Get a Quote |
| AGXT Knockout HeLa Cell Line | EDJ-KQ52583 | Human | 189 | Details Get a Quote |
| AGXT2 Knockout HeLa Cell Line | EDJ-KQ57092 | Human | 64902 | Details Get a Quote |
| AGXT Knockout A-549 Cell Line | EDJ-KQ61061 | Human | 189 | Details Get a Quote |
| AGXT2 Knockout A-549 Cell Line | EDJ-KQ65604 | Human | 64902 | Details Get a Quote |
| AGXT Knockout HCT 116 Cell Line | EDJ-KQ69543 | Human | 189 | Details Get a Quote |
| AGXT2 Knockout HCT 116 Cell Line | EDJ-KQ74032 | Human | 64902 | Details Get a Quote |
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