AGXT

Alanine–Glyoxylate Aminotransferase

Gene Information Card

Symbol AGXT
Full Name Alanine–glyoxylate aminotransferase
Gene Type Protein coding
Chromosomal Location 2q37.3
NCBI Gene ID 189 ncbi.nlm.nih.gov/gene/189
Ensembl ID ENSG00000172482
UniProt ID P21549
OMIM ID 604285
HGNC ID 341
Aliases AGT, AGT1, SPAT, SPT, TLH6

Description

The AGXT gene encodes alanine–glyoxylate aminotransferase, a peroxisomal enzyme that catalyzes the transamination of glyoxylate to glycine using alanine as the amino donor. This reaction is critical for detoxifying glyoxylate and preventing its conversion to oxalate. Mutations in AGXT cause primary hyperoxaluria type 1 (PH1), a rare autosomal recessive disorder characterized by excessive oxalate production, leading to kidney stones, nephrocalcinosis, and end-stage renal disease.

Disease Associations

Disease category Pathophysiological mechanism Genomic evidence
Primary hyperoxaluria type 1 (PH1) Loss-of-function mutations in AGXT reduce or abolish alanine–glyoxylate aminotransferase activity, leading to glyoxylate accumulation and conversion to oxalate by lactate dehydrogenase. ClinVar, OMIM
Oxalate nephropathy Secondary to PH1; elevated oxalate levels cause calcium oxalate crystal deposition in renal tubules, resulting in progressive kidney damage. ClinVar, OMIM

Expression Profile

Tissue Expression
Tissue nTPM level
Liver 57.3 High
Kidney 2.1 Low
Small intestine 1.5 Low
Pancreas 0.8 Not detected
Cell Line Expression
Cell Line nTPM Notes
HepG2 62.4 Hepatocellular carcinoma cell line; high expression
HEK 293 0.3 Embryonic kidney cells; very low expression
A549 0.1 Lung carcinoma; not detected
Data source:Human Protein Atlas(proteinatlas.org)

Mutations & Variants

Hotspot Mutations
Variant Type Frequency Functional Description
c.33_34insC (p.Leu12fs) Frameshift insertion ~20% in PH1 patients Loss of function; premature truncation
c.346G>A (p.Gly116Arg) Missense ~30% in PH1 patients Loss of function; impaired dimerization and peroxisomal targeting
c.731T>C (p.Ile244Thr) Missense ~10% in PH1 patients Loss of function; reduced catalytic activity
c.121G>A (p.Gly41Arg) Missense ~5% in PH1 patients Loss of function; protein misfolding
Mutation functional classification

Loss of Function (LOF)

Most AGXT mutations are loss-of-function, leading to deficient alanine–glyoxylate aminotransferase activity and accumulation of glyoxylate, which is converted to oxalate.

Gain of Function (GOF)

No gain-of-function mutations have been reported for AGXT.

Dominant Negative (DN)

No dominant-negative effects have been described; PH1 is autosomal recessive.

Pathways

Glyoxylate and dicarboxylate metabolism (KEGG: hsa00630)
Peroxisomal protein import (Reactome: R-HSA-9033241)
Metabolism of amino acids and derivatives (Reactome: R-HSA-71291)

Protein Summary

Alanine–glyoxylate aminotransferase (AGT) is a 392-amino-acid homodimeric peroxisomal enzyme encoded by AGXT. It uses pyridoxal phosphate as a cofactor to catalyze the transamination of glyoxylate to glycine, preventing oxalate formation. AGT is primarily expressed in the liver. Mislocalization to mitochondria due to mutations (e.g., p.Gly170Arg) is a known pathogenic mechanism in PH1. The protein has two domains: an N-terminal peroxisomal targeting signal (PTS1) and a C-terminal catalytic domain.

Related Products

Product name Cat.No. Species Gene ID
AGXT Knockout HEK293 Cell Line EDJ-KQ4027 Human 189 Details Get a Quote
AGXT2 Knockout HEK293 Cell Line EDJ-KQ12316 Human 64902 Details Get a Quote
AGXT Knockout HeLa Cell Line EDJ-KQ52583 Human 189 Details Get a Quote
AGXT2 Knockout HeLa Cell Line EDJ-KQ57092 Human 64902 Details Get a Quote
AGXT Knockout A-549 Cell Line EDJ-KQ61061 Human 189 Details Get a Quote
AGXT2 Knockout A-549 Cell Line EDJ-KQ65604 Human 64902 Details Get a Quote
AGXT Knockout HCT 116 Cell Line EDJ-KQ69543 Human 189 Details Get a Quote
AGXT2 Knockout HCT 116 Cell Line EDJ-KQ74032 Human 64902 Details Get a Quote
Displaying Records 1 To 8 Of 8 Records
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