Nanophthalmos 1 (NNO1) Cell Models for Research

Disease Burden and Research Significance

Epidemiology and Clinical Impact

Nanophthalmos 1 (NNO1) is a rare genetic eye disorder characterized by a small eye (axial length <20.5 mm) leading to high hyperopia and increased risk of angle-closure glaucoma. The prevalence is estimated at 1 in 10,000 to 1 in 50,000, with autosomal dominant inheritance. Clinical impact includes visual impairment and potential blindness. The disease is caused by mutations in the MFRP gene, which is essential for normal eye development. Early diagnosis and management are critical to prevent complications.

Value as a Research Model

NNO1 serves as a valuable model for studying eye development, particularly the regulation of axial length and refractive error. The disease provides insights into the molecular mechanisms of ocular growth and the pathogenesis of angle-closure glaucoma. Public datasets from NCBI and ClinVar provide mutation information, while functional studies using gene-edited cell models can elucidate the role of MFRP in retinal pigment epithelium and ciliary body. Open questions include the precise signaling pathways and potential therapeutic targets.

Core Molecular Pathogenesis

Major Pathogenic Pathways
  • • The primary pathway involves the MFRP gene, which encodes a membrane-type frizzled-related protein involved in Wnt signaling and eye development. Mutations lead to disrupted Wnt signaling, affecting retinal pigment epithelium (RPE) and ciliary body function. Key steps:
  • • MFRP interacts with Wnt ligands and receptors.
  • • Loss of MFRP function leads to aberrant Wnt signaling.
  • • Disrupted signaling affects ocular growth and axial length.
  • • Secondary effects include altered extracellular matrix remodeling and inflammation.
High-Frequency Genetic Alterations
GeneFrequency (%)Mutation TypeFunctional Effect
MFRP~50%Missense, nonsense, frameshiftLoss of function, dominant negative
PRSS56~20%MissenseReduced protease activity
BEST1~10%MissenseAltered ion transport
CRB1~5%MissenseDisrupted cell polarity

Data from ClinVar and literature.

Deregulated Signaling Networks
  • • Key networks affected in NNO1 include:
  • • Wnt signaling: MFRP modulates Wnt pathway, affecting cell proliferation and differentiation.
  • • TGF-beta signaling: Involved in extracellular matrix regulation.
  • • Retinoic acid signaling: Important for eye development.
  • • Key nodes: MFRP, LRP6, FZD4, β-catenin, TGFBR1, SMAD3.

Experimental Model Systems

Cell Lines and Organoids
Cell LineOriginKey Mutations
ARPE-19Human RPEWild-type MFRP
RPE-1Human RPEWild-type MFRP
HCT116ColonMFRP knockdown possible
HEK293KidneyUsed for overexpression studies

Organoids derived from patient iPSCs can recapitulate retinal development and are useful for studying MFRP function.

Animal Models (PDX, GEMM, Induced)
  • • Mfrp knockout mice: Show reduced axial length and retinal degeneration.
  • • Mfrp knock-in mice: Model specific mutations.
  • • Zebrafish models: Used for high-throughput screening.
  • • PDX models: Limited for eye diseases, but possible for ocular tumors.
Gene-Edited Cell Models

CRISPR-based gene editing enables the creation of isogenic cell lines with specific MFRP mutations. For example, a MFRP knockout ARPE-19 cell line can be generated to study loss-of-function effects. Alternatively, a knock-in line with a specific pathogenic mutation (e.g., c.498_499del) can be created to model the disease. These sequence-verified models are commercially available and accelerate research by providing consistent, reproducible systems for mechanistic studies and drug screening.

Related Disease

Disease name Disease type

Related Products

Product name Cat.No. Species Gene ID
MYRF Knockout HEK293 Cell Line EDJ-KQ1012 Human 745 Details Get a Quote
TMEM98 Knockout HEK293 Cell Line EDJ-KQ8357 Human 26022 Details Get a Quote
MFRP Knockout HEK293 Cell Line EDJ-KQ9862 Human 83552 Details Get a Quote
MYRF Knockout A-549 Cell Line EDJ-KQ20077 Human 745 Details Get a Quote
MYRF Knockout HCT 116 Cell Line EDJ-KQ20078 Human 745 Details Get a Quote
MYRF Knockout HeLa Cell Line EDJ-KQ20079 Human 745 Details Get a Quote
TMEM98 Knockout A-549 Cell Line EDJ-KQ34388 Human 26022 Details Get a Quote
TMEM98 Knockout HCT 116 Cell Line EDJ-KQ34389 Human 26022 Details Get a Quote
TMEM98 Knockout HeLa Cell Line EDJ-KQ55867 Human 26022 Details Get a Quote
MFRP Knockout HeLa Cell Line EDJ-KQ57452 Human 83552 Details Get a Quote
MFRP Knockout A-549 Cell Line EDJ-KQ65956 Human 83552 Details Get a Quote
MFRP Knockout HCT 116 Cell Line EDJ-KQ74379 Human 83552 Details Get a Quote
Displaying Records 1 To 12 Of 12 Records

Applications of Gene-Edited Cells

Functional Genomics

Knockout and knock-in lines are used to validate the role of MFRP in eye development. For example, MFRP knockout in ARPE-19 cells can be used to study changes in Wnt signaling and gene expression. Knock-in lines with specific mutations can help determine genotype-phenotype correlations.

Drug Screening and Resistance

Isogenic pairs (wild-type vs. mutant) are ideal for high-throughput screening of compounds that modulate Wnt signaling or rescue MFRP function. Resistance mechanisms can be studied by exposing cells to drugs and selecting for resistant clones.

Biomarker Discovery

CRISPR synthetic lethality screens can identify genes that are essential in MFRP-mutant cells but not in wild-type, providing potential therapeutic targets. Such screens can also identify biomarkers for early diagnosis.

Public Data Resources

DatabaseURLDescription
NCBI Genehttps://www.ncbi.nlm.nih.gov/gene/Gene information for MFRP and related genes
ClinVarhttps://www.ncbi.nlm.nih.gov/clinvar/Variant interpretations for NNO1
UniProthttps://www.uniprot.org/Protein information for MFRP
DepMaphttps://depmap.org/Dependency and expression data for cell lines
COSMIChttps://cancer.sanger.ac.uk/cosmicSomatic mutations in cancer (if relevant)
TCGAhttps://www.cancer.gov/tcgaCancer genomics data (if applicable)

Frequently Asked Research Questions

The most common mutations are in the MFRP gene, including missense and frameshift mutations.
CRISPR-Cas9 can be used to introduce indels in the MFRP gene. Commercially available kits and services are available.
ARPE-19 and RPE-1 are commonly used. Organoids derived from patient iPSCs are also valuable.
Yes, isogenic pairs allow for high-throughput screening of compounds that rescue MFRP function.
ClinVar and NCBI Gene provide curated mutation data.

Key References and Database URLs

WHO https://www.who.int/
NCI https://www.cancer.gov/
NCBI Gene https://www.ncbi.nlm.nih.gov/gene/
ClinVar https://www.ncbi.nlm.nih.gov/clinvar/
UniProt https://www.uniprot.org/
DepMap https://depmap.org/
COSMIC https://cancer.sanger.ac.uk/cosmic
TCGA https://www.cancer.gov/tcga
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