Cardiovascular Disease Cell Models for Research

Disease Burden and Research Significance

Epidemiology and Clinical Impact

Cardiovascular diseases (CVDs) remain the leading cause of global mortality, accounting for approximately 17.9 million deaths each year (WHO, 2021). This represents about 32% of all global deaths. The primary contributors are ischemic heart disease and stroke, which together cause over 85% of CVD deaths. Key risk factors include hypertension, dyslipidemia, diabetes, smoking, and physical inactivity. The economic burden is substantial, with direct and indirect costs estimated in the hundreds of billions annually in the US alone (NCI). While survival rates for acute events have improved, the chronic nature of heart failure and other CVDs imposes a significant long-term burden. Five-year survival varies widely by condition; for example, heart failure has a 5-year survival of approximately 50% (NCI).

Value as a Research Model

CVD encompasses a diverse range of pathologies, including atherosclerosis, cardiomyopathy, arrhythmias, and heart failure. This heterogeneity makes it an ideal subject for mechanistic studies. The availability of well-characterized cell lines (e.g., AC16, H9c2, iPSC-derived cardiomyocytes) and public datasets (e.g., GTEx, GEO) facilitates research. Open questions include the molecular basis of disease susceptibility, the role of genetic variants in drug response, and the development of resistance to therapies. Gene-edited cell models provide a powerful tool to dissect these mechanisms and validate novel therapeutic targets.

Core Molecular Pathogenesis

Major Pathogenic Pathways

Several pathways are central to CVD pathogenesis:

  • • Lipid Metabolism and Atherosclerosis: Dysregulation of LDL cholesterol uptake via LDLR, PCSK9-mediated degradation, and cholesterol efflux via ABCA1/ABCG1.
  • • Inflammation and Immune Response: Activation of NF-κB, NLRP3 inflammasome, and cytokine signaling (IL-6, TNF-α) in endothelial cells and macrophages.
  • • Renin-Angiotensin-Aldosterone System (RAAS): Overactivation leads to vasoconstriction, fibrosis, and hypertrophy.
  • • Calcium Handling and Excitation-Contraction Coupling: Mutations in ion channels (e.g., SCN5A, KCNQ1) and calcium regulators (RYR2, SERCA) cause arrhythmias and cardiomyopathy.
High-Frequency Genetic Alterations
GeneFrequency (%)Mutation TypeFunctional Effect
PCSK91-3% (gain-of-function)MissenseIncreased LDL receptor degradation, hypercholesterolemia
LDLR1-10% (familial hypercholesterolemia)Loss-of-functionReduced LDL clearance, elevated plasma LDL
APOB1-5% (familial hypercholesterolemia)MissenseDefective LDL binding, hypercholesterolemia
MYH71-5% (hypertrophic cardiomyopathy)MissenseSarcomere dysfunction, hypertrophy
SCN5A1-3% (Brugada syndrome)MissenseAltered sodium current, arrhythmia
KCNQ11-2% (long QT syndrome)MissenseReduced potassium current, prolonged QT interval
TTN10-25% (dilated cardiomyopathy)TruncatingSarcomere disruption, dilated cardiomyopathy

Data from ClinVar and COSMIC.

Deregulated Signaling Networks

Key signaling networks in CVD include:

  • • MAPK/ERK Pathway: Involved in cardiomyocyte hypertrophy and fibrosis. Key nodes: RAS, RAF, MEK, ERK.
  • • PI3K/AKT Pathway: Regulates cell survival, growth, and metabolism. Key nodes: PI3K, AKT, mTOR.
  • • Wnt/β-Catenin Pathway: Plays a role in cardiac development and remodeling. Key nodes: Wnt, LRP5/6, β-catenin.
  • • TGF-β/SMAD Pathway: Mediates fibrosis and inflammation. Key nodes: TGF-β, SMAD2/3, SMAD4.
  • • Calcium/Calcineurin/NFAT Pathway: Critical for cardiac hypertrophy. Key nodes: Ca2+, calcineurin, NFAT.

Experimental Model Systems

Cell Lines and Organoids
Cell LineOriginKey Mutations
AC16Human ventricular cardiomyocyteNone (immortalized)
H9c2Rat embryonic cardiomyocyteNone (immortalized)
iPSC-CMHuman induced pluripotent stem cell-derived cardiomyocytesVaries by donor; can be gene-edited
HAECHuman aortic endothelial cellsNone (primary)
HASMCHuman aortic smooth muscle cellsNone (primary)
THP-1Human monocytic leukemiaNone (can differentiate to macrophages)

Organoids, such as cardiac organoids derived from iPSCs, offer a more physiologically relevant 3D model that recapitulates cell-cell interactions and tissue-level functions.

Animal Models (PDX, GEMM, Induced)
  • • PDX (Patient-Derived Xenograft): Not commonly used for CVD, but can be used for cardiac tumors.
  • • GEMM (Genetically Engineered Mouse Models): Examples include ApoE-/- and LDLR-/- mice for atherosclerosis, and MYH7 mutant mice for cardiomyopathy.
  • • Induced Models: Surgical models like transverse aortic constriction (TAC) for heart failure, and ischemia-reperfusion injury models.
Gene-Edited Cell Models

CRISPR-Cas9 technology enables the creation of isogenic cell lines with precise genetic modifications, such as knockouts (KO) of disease-associated genes or knock-ins (KI) of specific mutations. For example, a PCSK9 knockout in HepG2 cells can be used to study LDL receptor regulation, while a MYH7 R403Q knock-in in iPSC-CMs can model hypertrophic cardiomyopathy. These gene-edited cell models are commercially available from several vendors, providing sequence-verified, quality-controlled cells that accelerate research. They are essential for validating drug targets and understanding disease mechanisms.

Related Disease

Disease name Disease type

Related Products

Product name Cat.No. Species Gene ID
Ppard Knockout NIT-1 Cell Line EDJ-KQ60 Mouse 19015 Details Get a Quote
LRP1 Knockout HEK293 Cell Line EDJ-KQ103 Human 4035 Details Get a Quote
PPARD Knockout HEK293 Cell Line EDJ-KQ115 Human 5467 Details Get a Quote
SFRP5 Knockout HEK293 Cell Line EDJ-KQ333 Human 6425 Details Get a Quote
FOXO3 Knockout HEK293 Cell Line EDJ-KQ795 Human 2309 Details Get a Quote
PRKAA2 Knockout HEK293 Cell Line EDJ-KQ861 Human 5563 Details Get a Quote
IL33 Knockout HEK293 Cell Line EDJ-KQ1106 Human 90865 Details Get a Quote
SIRT1 Knockout HEK293 Cell Line EDJ-KQ1128 Human 23411 Details Get a Quote
SLC2A4 Knockout HEK293 Cell Line EDJ-KQ1523 Human 6517 Details Get a Quote
P2RX4 Knockout HEK293 Cell Line EDJ-KQ1573 Human 5025 Details Get a Quote
ADIPOQ Knockout HEK293 Cell Line EDJ-KQ1859 Human 9370 Details Get a Quote
ADIPOR1 Knockout HEK293 Cell Line EDJ-KQ1860 Human 51094 Details Get a Quote
ADIPOR2 Knockout HEK293 Cell Line EDJ-KQ1861 Human 79602 Details Get a Quote
ACACB Knockout HEK293 Cell Line EDJ-KQ1874 Human 32 Details Get a Quote
RARRES2 Knockout HEK293 Cell Line EDJ-KQ1942 Human 5919 Details Get a Quote
Displaying Records 1 To 15 Of 160 Records

Applications of Gene-Edited Cells

Functional Genomics

Gene-edited cells are used to validate the function of genes identified in GWAS or sequencing studies. For example, knocking out the LDLR gene in hepatocytes confirms its role in cholesterol uptake. Similarly, introducing a specific SCN5A mutation into cardiomyocytes can elucidate its effect on sodium current and arrhythmia susceptibility.

Drug Screening and Resistance

Isogenic pairs (wild-type vs. gene-edited) are used in high-throughput screens to identify compounds that selectively target mutant cells. For instance, a PCSK9 knockout cell line can be used to test the efficacy of PCSK9 inhibitors. Resistance mechanisms can be studied by exposing cells to drugs and selecting for resistant clones, then identifying the genetic changes.

Biomarker Discovery

CRISPR screens can identify genes that, when knocked out, confer resistance or sensitivity to certain treatments. Synthetic lethality screens in cardiovascular cells can reveal novel therapeutic targets. For example, knocking out a gene that is essential for the survival of cells with a specific mutation may identify a vulnerability that can be exploited therapeutically.

Public Data Resources

DatabaseURLDescription
TCGAhttps://www.cancer.gov/tcgaThe Cancer Genome Atlas (not specific to CVD, but includes relevant data)
cBioPortalhttps://www.cbioportal.orgVisualization and analysis of cancer genomics data
DepMaphttps://depmap.orgDependency Map: CRISPR screens and gene expression data
GEOhttps://www.ncbi.nlm.nih.gov/geo/Gene Expression Omnibus: microarray and RNA-seq data
ClinVarhttps://www.ncbi.nlm.nih.gov/clinvar/Database of clinically relevant variants
UniProthttps://www.uniprot.orgProtein sequence and functional information

Frequently Asked Research Questions

For atherosclerosis, human aortic endothelial cells (HAEC) or smooth muscle cells (HASMC) are commonly used. For cholesterol metabolism, hepatocyte cell lines like HepG2 are suitable. Gene-edited versions of these cells can be generated to study specific genes.
You can design guide RNAs targeting the gene of interest, deliver them with Cas9 into the cell line, and select for clones with the desired knockout. Alternatively, you can purchase pre-made knockout cell lines from commercial sources.
iPSC-CMs are more physiologically relevant, as they express cardiac-specific ion channels and contractile proteins. They can be gene-edited to carry disease mutations and are useful for drug testing and disease modeling.
Validation typically includes Sanger sequencing of the edited region, western blot to confirm protein knockout or knock-in, and functional assays relevant to the gene's role.
Yes, isogenic cell lines are ideal for high-throughput screens because they provide a controlled genetic background, reducing variability and allowing for the identification of specific drug effects.

Key References and Database URLs

World Health Organization (WHO) Cardiovascular Diseases https://www.who.int/health-topics/cardiovascular-diseases
National Cancer Institute (NCI) SEER Data https://seer.cancer.gov
NCBI Gene https://www.ncbi.nlm.nih.gov/gene
ClinVar https://www.ncbi.nlm.nih.gov/clinvar
COSMIC https://cancer.sanger.ac.uk/cosmic
DepMap https://depmap.org
cBioPortal https://www.cbioportal.org
GTEx Portal https://gtexportal.org
UK Biobank https://www.ukbiobank.ac.uk
WHO Cardiovascular Diseases Fact Sheet https://www.who.int/news-room/fact-sheets/detail/cardiovascular-diseases-(cvds
NCI SEER Cancer Statistics https://seer.cancer.gov/statfacts/html/heart.html
NCBI Gene https://www.ncbi.nlm.nih.gov/gene/
ClinVar https://www.ncbi.nlm.nih.gov/clinvar/
UniProt https://www.uniprot.org
Contact Us
*
*
*
*
How did you hear about us: