CD9 Knockout HEK293 Cell Line
Cat.No.:
EDC07539
Species:
Human
Cell Name:
HEK293
Gene:
CD9
Gene ID:
928
Size:
1×10⁶cells
CD9 Knockout Cell Line (HEK293) is an exclusive upgraded CRISPR/Cas9 system-mediated gene knockout cell, with the advantages of Optimized Strategy Design, Efficient Cell Transfection, High-Performance Cas9 Protein and Hassle-Free Cell Selection.
| Cat.No. | EDC07539 |
|---|---|
| Product Name | CD9 Knockout Cell Line (HEK293) |
| Cell Line | HEK293 |
| Cellosaurus ID | CVCL_0045 |
| Cell Line Synonyms | Hek293, HEK-293, HEK/293, (HEK)293, HEK 293, HEK,293, 293, 293 HEK, 293 Ad5, Graham 293, Graham-293, Human Embryonic Kidney 293 |
| Gene |
CD9 |
| NCBI Gene ID | |
| Gene Synonyms | BTCC-1|DRAP-27|MIC3|MRP-1|TSPAN-29|TSPAN29 |
| Summary |
This gene encodes a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Tetraspanins are cell surface glycoproteins with four transmembrane domains that form multimeric complexes with other cell surface proteins. The encoded protein functions in many cellular processes including differentiation, adhesion, and signal transduction, and expression of this gene plays a critical role in the suppression of cancer cell motility and metastasis. [provided by RefSeq, Jan 2011]
|
| Associated Diseases | Non-tumor |
| Morphology | Adherent |
| Passage Ratio | 1/5,2days |
| Complete Culture Medium | DMEM + 10% FBS |
| Freezing Medium | 95% Complete culture medium+ 5% DMSO |
| QC | Indels validated by Sanger sequencing; sterility confirmed via microbial testing. |
* For research use only. Not intended for use in humans or animals, including clinical, therapeutic, or diagnostic purposes.
| Loci | STR Info (Sample Cell) Sample Cell Line: HEK293 | STR Info (Cell bank) Cell Line: HEK293 | ||
| Allele1 | Allele2 | Allele1 | Allele2 | |
| Amelogenin | X | X | ||
| CSF1P0 | 12 | 11 | 12 | |
| D2S1338 | 19 | 19 | ||
| D3S1358 | 15 | 17 | 15 | 17 |
| D5S818 | 8 | 8 | 9 | |
| D7S820 | 11 | 12 | 11 | 12 |
| D8S1179 | 12 | 14 | 12 | 14 |
| D13S317 | 12 | 14 | 12 | 14 |
| D16S539 | 9 | 13 | 9 | 13 |
| D18S51 | 17 | 18 | 17 | 18 |
| D19S433 | 15 | 18 | 15 | 18 |
| D21S11 | 28 | 30.2 | 28 | 30.2 |
| FGA | 23 | 23 | ||
| Penta D | 9 | 10 | 9 | 10 |
| Penta E | 7 | 15 | 7 | 15 |
| TH01 | 7 | 9.3 | 7 | 9.3 |
| TPOX | 11 | 11 | ||
| vWA | 16 | 19 | 16 | 19 |
| D6S1043 | 11 | 11 | ||
| D12S391 | 19 | 21 | 11 | 15 |
| D2S441 | 11 | 15 | 11 | 15 |
* STR authentication data of this cell line matches with that of cell lines sourced from ATCC, DSMZ, JCRB, and RIKEN databases.
Conclusion: The STR identification of this cell is correct.
Conclusion: The STR identification of this cell is correct.
FAQ
Which is better for studying CD9 function, CD9 Knockout HEK293 Cell Line or CD9 overexpression HEK293 Cell Line?
The choice depends on whether you are studying CD9 (tetraspanin TSPAN29)'s role as a classical tetraspanin or modeling its functions in cell-cell fusion, exosome biology, and cancer metastasis. The Knockout line is the standard tool for asking whether CD9 is required for these processes — CD9 is a four-transmembrane tetraspanin that organizes tetraspanin-enriched microdomains (TEMs) at the cell surface, associating with integrins, ADAMs, and other partners; CD9 is essential for sperm-egg fusion (CD9 is on the oocyte), platelet aggregation, and is a classical exosome surface marker. Overexpression is useful for studying CD9 in heterologous expression contexts.
For tetraspanin and exosome research, the EDITGENE CD9 Knockout in HEK293 enables systematic study of tetraspanin biology. Other tetraspanin family member (CD81, CD63, CD151) expression analysis aids interpretation. Rescue with wild-type CD9 is the standard specificity control. The knockout is valuable for studying CD9-mediated cell-cell interactions, CD9 as an exosome marker (CD9-null exosomes can be used to study CD9-dependent vs CD9-independent exosome cargo and function), and emerging CD9-targeted therapeutics in cancer metastasis research.
What are the application scenarios for this model?
Primary applications:
• Tetraspanin-enriched microdomains: CD9-integrin and CD9-ADAM partnership analysis in CD9-null cells.
• Exosome biology: CD9-null exosomes can be characterized for CD9-dependent vs independent cargo loading and function.
• Cell-cell fusion: in heterologous fusion-relevant contexts (sperm-egg, virus-cell, cell-cell), CD9's role in fusogenic processes.
• Cancer metastasis: in heterologous cancer-relevant contexts, CD9's emerging roles in metastasis biology.
EDITGENE recommends this model for researchers investigating tetraspanin biology and exosome marker function.
Is this CD9 Knockout HEK293 Cell Line compatible with overexpression rescue experiments?
Yes. CD9 rescue experiments require attention to tetraspanin architecture:
• Construct design: use a codon-modified CD9 sequence with a small intracellular tag (FLAG, HA). CD9 is a four-transmembrane tetraspanin with two extracellular loops (EC1, EC2) and intracellular termini — preserve membrane topology.
• Surface localization validation: confirm plasma membrane localization by cell surface staining before functional assays.
• Partner-binding-deficient rescue: EC2 loop mutations disrupt specific tetraspanin partner interactions.
• Functional readout: rescue should restore CD9-dependent tetraspanin-enriched microdomain organization.
HEK293 transduces efficiently with lentivirus and supports stable rescue line generation.
* Research Use Disclaimer: Content is generated from publicly available research data, bioinformatic resources, and computational analyses for research reference only.
Related Publications
Conserved use of tetraspanin CD9 as an entry receptor by rhabdoviruses spanning multiple genera.
IF=9.1
Proceedings of the National Academy of Sciences of the United States of America
Rhabdoviruses exhibit a broad host range, yet the cellular receptors underlying their cross-species tropism remain poorly defined. Here, we identified tetraspanin CD9 as a conserved functional entry receptor for diverse rhabdoviruses across genera, including viral hemorrhagic septicemia virus (VHSV) (), rhabdovirus (SCRV) (), and vesicular stomatitis virus (VSV) (). We demonstrated that the domain IV of VHSV glycoprotein G directly interacted with the large extracellular loop domain of CD9 (LjCD9). CD9 knockout, CD9 protein, or CD9 antibody significantly reduced VHSV infection in vitro and CD9 knockout zebrafish, while HEK293T cells, which are nonsusceptible but permissive to VHSV, become susceptible when expressing LjCD9, suggesting that LjCD9 is an entry receptor for VHSV. We further confirmed that LjCD9 functions as a functional receptor of SCRV. Importantly, the human CD9 orthologue can serve as a receptor of VSV. Our findings also revealed that LjCD9 mediated VHSV entry via clathrin- and caveolae-mediated endocytosis. Notably, nitazoxanide (NTZ) was identified as a broad-spectrum inhibitor of VHSV, SCRV, and VSV likely by interfering with the G protein-CD9 interaction. This study establishes CD9 as a cross-species receptor for rhabdoviruses and highlights NTZ as a promising broad-spectrum antiviral agent.
This KO model may be useful for:
- Investigating clathrin- and caveolae-mediated endocytosis pathways for viral entry
- Studying the role of CD9 in rhabdovirus cross-species tropism, including VHSV, SCRV, and VSV
- Screening or validating broad-spectrum antiviral agents targeting the G protein-CD9 interaction, such as nitazoxanide (NTZ)
- Modeling receptor-dependent susceptibility in non-permissive cell types for viral infection assays
- Functional analysis of the large extracellular loop domain of CD9 in receptor-mediated entry
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