SQSTM1 Knockout HEK293 Cell Line
Cat.No.:
EDC08337
Species:
Human
Cell Name:
HEK293
Gene:
SQSTM1
Gene ID:
8878
Size:
1×10⁶cells
SQSTM1 Knockout HEK293 Cell Line is an exclusive upgraded CRISPR/Cas9 system-mediated gene knockout cell, with the advantages of Optimized Strategy Design, Efficient Cell Transfection, High-Performotion Cas9 Protein and Hassle-Free Cell Selection.
| Cat.No. | EDC08337 |
|---|---|
| Product Name | SQSTM1 Knockout HEK293 Cell Line |
| Species | Human |
| Cell Line | HEK293 |
| Cellosaurus ID | CVCL_0045 |
| Gene ID | |
| Cell Line Synonyms | Hek293, HEK-293, HEK/293, (HEK)293, HEK 293, HEK,293, 293, 293 HEK, 293 Ad5, Graham 293, Graham-293, Human Embryonic Kidney 293 |
| Gene | SQSTM1 |
| Gene Synonyms | A170|DMRV|EBIAP|FTDALS3|NADGP|OSIL|PDB3|ZIP3|p60|p62|p62B |
| Summary |
This gene encodes a multifunctional protein that binds ubiquitin and regulates activation of the nuclear factor kappa-B (NF-kB) signaling pathway. The protein functions as a scaffolding/adaptor protein in concert with TNF receptor-associated factor 6 to mediate activation of NF-kB in response to upstream signals. Alternatively spliced transcript variants encoding either the same or different isoforms have been identified for this gene. Mutations in this gene result in sporadic and familial Paget disease of bone. [provided by RefSeq, Mar 2009]
|
| Digestion Time | ~1 min |
| Associated Diseases | Non-tumor |
| Morphology | Adherent |
| Passage Ratio | 1:3 |
| Complete Culture Medium | DMEM+10% FBS |
| Freezing Medium | 95% complete culture medium + 5% DMSO |
* For research use only. Not intended for use in humans or animals, including clinical, therapeutic, or diagnostic purposes.
| Loci | STR Info (Sample Cell) Sample Cell Line: HEK293 | STR Info (Cell bank) Cell Line: HEK293 | ||
| Allele1 | Allele2 | Allele1 | Allele2 | |
| Amelogenin | X | X | ||
| CSF1P0 | 12 | 11 | 12 | |
| D2S1338 | 19 | 19 | ||
| D3S1358 | 15 | 17 | 15 | 17 |
| D5S818 | 8 | 8 | 9 | |
| D7S820 | 11 | 12 | 11 | 12 |
| D8S1179 | 12 | 14 | 12 | 14 |
| D13S317 | 12 | 14 | 12 | 14 |
| D16S539 | 9 | 13 | 9 | 13 |
| D18S51 | 17 | 18 | 17 | 18 |
| D19S433 | 15 | 18 | 15 | 18 |
| D21S11 | 28 | 30.2 | 28 | 30.2 |
| FGA | 23 | 23 | ||
| Penta D | 9 | 10 | 9 | 10 |
| Penta E | 7 | 15 | 7 | 15 |
| TH01 | 7 | 9.3 | 7 | 9.3 |
| TPOX | 11 | 11 | ||
| vWA | 16 | 19 | 16 | 19 |
| D6S1043 | 11 | 11 | ||
| D12S391 | 19 | 21 | 11 | 15 |
| D2S441 | 11 | 15 | 11 | 15 |
* STR authentication data of this cell line matches with that of cell lines sourced from ATCC, DSMZ, JCRB, and RIKEN databases.
Conclusion: The STR identification of this cell is correct.
Conclusion: The STR identification of this cell is correct.
FAQ
Which is better for studying SQSTM1 function, SQSTM1 Knockout HEK293 Cell Line or SQSTM1 overexpression HEK293 Cell Line?
The choice depends on whether you are studying p62's signaling functions or its scaffolding roles in NF-κB and Nrf2 pathway activation — applications where HEK293's high transfection efficiency provides advantages. The Knockout line is appropriate for biochemical studies of these signaling pathways and for reporter assay-based mechanism research. Overexpression is useful for testing condensation behavior, scaffolding capacity, and reporter readouts of NF-κB or ARE/Nrf2-driven gene expression.
For p62 mechanistic research, the EDITGENE p62 Knockout in HEK293 is particularly suited to reporter-based and biochemical studies — HEK293 supports robust NF-κB-luc and ARE-luc reporters, and its transfection efficiency facilitates rapid structure-function screening. This product complements the parallel p62 Knockout in HeLa (preferred for imaging-based autophagy phenotypes). Rescue with wild-type or domain-mutant (PB1, ZZ, UBA, LIR, KIR) p62 enables systematic mapping of p62's multi-domain functions.
What are the application scenarios for this model?
Primary applications:
• NF-κB pathway: NF-κB reporter assays and target gene expression analysis to assess p62's scaffolding function in NF-κB activation.
• Nrf2/Keap1 pathway: ARE-driven reporter assays (HMOX1, NQO1) and Keap1 sequestration analysis given p62's role in non-canonical Nrf2 activation.
• mTORC1 regulation: phospho-S6K and phospho-4E-BP1 analysis to assess p62's contribution to amino acid-dependent mTORC1 activation.
• Biochemical structure-function: HEK293's transfection efficiency enables systematic screening of p62 multi-domain (PB1, ZZ, UBA, LIR, KIR) mutant rescues.
EDITGENE recommends this model for researchers investigating p62 signaling functions, particularly NF-κB and Nrf2 pathway studies and structure-function mechanism research.
Is this SQSTM1 Knockout HEK293 Cell Line compatible with overexpression rescue experiments?
Yes. p62 rescue in HEK293 is optimized for biochemical and signaling studies:
• Construct design: use a codon-modified SQSTM1 sequence with a small tag (FLAG, HA). HEK293's high transfection efficiency supports rapid screening of p62 domain mutants.
• Signaling pathway-specific rescue: KIR mutation (W347A, T350A) abolishes Keap1 binding for Nrf2 studies; ZZ domain mutations affect RIP1 binding for NF-κB studies; PB1 mutations affect aPKC/MEK5 interactions.
• Reporter assay readouts: NF-κB-luc and ARE-luc reporters in HEK293 enable quantitative comparison of p62 domain mutant rescue effects on each signaling pathway.
• Combined panel design: systematic rescue with single and combined domain mutants in HEK293 is the standard approach for mapping p62 multi-functional contributions.
HEK293 transduces efficiently with lentivirus and has the highest transfection efficiency among p62 product cell lines, making it the preferred choice for biochemical structure-function studies.
* Research Use Disclaimer: Content is generated from publicly available research data, bioinformatic resources, and computational analyses for research reference only.
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