GO:0047726 iron-cytochrome-c reductase activity: Mechanism, Genes and Research Methods
Research-grade guide for scientists and biopharma professionals
Key Takeaways
• GO:0047726 iron-cytochrome-c reductase activity catalyzes the reversible electron transfer between Fe3+ and Fe(II)-[cytochrome c], producing Fe2+ and Fe(III)-[cytochrome c].
• The reaction is central to iron homeostasis and cellular redox balance, as it directly interconverts ferric and ferrous iron pools.
• Iron deficiency alters tissue cytochrome c levels and iron-dependent redox enzymes, highlighting the physiological importance of this activity.
• In acidophilic bacteria such as Acidithiobacillus ferrooxidans, iron-cytochrome-c reductase activity is linked to iron oxidation and energy metabolism, and is inhibited by tungsten.
• Dysregulation of iron-cytochrome-c reductase activity can contribute to oxidative stress and mitochondrial dysfunction, with implications for cancer and neurodegenerative diseases.
• CRISPR knockout, point-mutation, knock-in, and overexpression models enable precise dissection of genes encoding iron-cytochrome-c reductase activity [1,2].
Description
Iron-cytochrome-c reductase activity (GO:0047726) is a molecular function that catalyzes the reversible redox reaction between ferric iron (Fe3+) and ferrous cytochrome c (Fe(II)-[cytochrome c]), yielding ferrous iron (Fe2+) and ferric cytochrome c (Fe(III)-[cytochrome c]). This activity sits at the intersection of iron metabolism and mitochondrial electron transport, influencing both cellular iron homeostasis and the redox state of cytochrome c. Because iron is essential for numerous biological processes, including oxygen transport, DNA synthesis, and oxidative phosphorylation, the enzyme responsible for this interconversion is of broad physiological relevance. In iron-deficiency states, tissue cytochrome c levels and iron-dependent enzyme activities are altered, underscoring the importance of iron-cytochrome-c reductase activity in maintaining normal cellular function. In acidophilic bacteria, a homologous activity participates in iron oxidation and energy generation, and its inhibition by tungsten disrupts growth, demonstrating its role in microbial bioenergetics. Researchers studying iron metabolism, mitochondrial function, and redox signaling therefore require reliable tools to manipulate and measure this activity in model systems [1,2].
iron-cytochrome-c reductase activity At A Glance
| GO ID | GO:0047726 |
|---|---|
| GO term | iron-cytochrome-c reductase activity |
| Ontology | molecular_function |
| Synonym | ferrocytochrome-c:Fe3+ oxidoreductase activity; iron-cytochrome c reductase activity |
| Definition | Catalysis of the reaction: Fe3+ + Fe(II)-[cytochrome c] = Fe2+ + Fe(III)-[cytochrome c] |
| Major function | Electron transfer between iron and cytochrome c, maintaining redox balance |
| Reaction direction | Reversible |
| Substrates | Fe3+, Fe(II)-[cytochrome c] |
| Products | Fe2+, Fe(III)-[cytochrome c] |
What Is GO:0047726?
According to the Gene Ontology, iron-cytochrome-c reductase activity (GO:0047726) is defined as the catalysis of the reaction: Fe3+ + Fe(II)-[cytochrome c] = Fe2+ + Fe(III)-[cytochrome c]. In other words, it is an oxidoreductase that transfers an electron from ferrous cytochrome c to ferric iron, or vice versa, thereby interconverting the oxidation states of iron and cytochrome c. This activity is synonymous with ferrocytochrome-c:Fe3+ oxidoreductase activity and iron-cytochrome c reductase activity.
Why Is iron-cytochrome-c reductase activity Important in Cell Biology?
Iron-cytochrome-c reductase activity is important because it directly links iron redox chemistry to cytochrome c, a key electron carrier in mitochondrial respiration and apoptosis. By interconverting Fe3+ and Fe2+, this activity helps regulate the labile iron pool, which influences oxidative stress through Fenton chemistry. In iron deficiency, changes in tissue cytochrome c and iron-dependent enzymes can impair energy metabolism and cellular function. In bacteria, the corresponding activity supports iron oxidation and growth, and its inhibition by tungsten disrupts cellular energetics. Thus, understanding this activity is relevant to iron biology, mitochondrial physiology, and microbial bioenergetics.
• Maintains redox balance between ferric and ferrous iron pools.
• Supports cytochrome c-mediated electron transport in mitochondria.
• Modulates oxidative stress via regulation of labile iron.
• Contributes to iron homeostasis in tissues, as shown in iron-deficient rats.
• Plays a role in bacterial iron oxidation and energy metabolism.
• Is a target for tungsten toxicity in Acidithiobacillus ferrooxidans.
• Relevant to mitochondrial dysfunction in metabolic and neurodegenerative diseases.
• Provides a mechanistic link between iron metabolism and apoptosis.
• Can be studied using CRISPR-based gene editing to dissect gene function [1,2].
• Potential biomarker or therapeutic target in iron-related disorders.
What Happens During iron-cytochrome-c reductase activity?
Substrate binding and electron transfer
In simple terms: The enzyme grabs iron and cytochrome c and moves an electron between them.
The reaction begins with the binding of Fe3+ and Fe(II)-[cytochrome c] to the enzyme active site. The enzyme facilitates electron transfer from ferrous cytochrome c to ferric iron, generating Fe2+ and Fe(III)-[cytochrome c]. This reversible interconversion is central to the catalytic cycle and can proceed in either direction depending on the redox environment.
Iron redox cycling and cellular iron pool
In simple terms: The enzyme changes iron's charge, which affects how cells handle iron.
By converting Fe3+ to Fe2+ and vice versa, the activity influences the labile iron pool, which is a key determinant of cellular susceptibility to oxidative damage. In iron deficiency, tissue iron levels drop, and the activity of iron-dependent enzymes, including cytochrome c-related ones, is altered.
Cytochrome c oxidation state and mitochondrial function
In simple terms: The enzyme also changes cytochrome c, which is important for energy production.
The oxidation state of cytochrome c affects its function in the mitochondrial electron transport chain. By generating Fe(III)-[cytochrome c], the activity may modulate electron flux and reactive oxygen species production. This interplay is critical for maintaining mitochondrial bioenergetics.
Microbial iron oxidation and energy generation
In simple terms: In some bacteria, this activity helps them get energy from iron.
In Acidithiobacillus ferrooxidans, iron-cytochrome-c reductase activity is part of the iron oxidation pathway that supports growth. Tungsten inhibits this activity, leading to growth inhibition, demonstrating its essential role in bacterial energy metabolism.
Key Genes Involved in GO:0047726 iron-cytochrome-c reductase activity
The following genes and proteins are associated with iron-cytochrome-c reductase activity or related iron-cytochrome redox processes, based on published literature.
| Gene | Major Role | Research Relevance |
|---|---|---|
| CYCS | Cytochrome c, electron carrier | Substrate for iron-cytochrome-c reductase activity; central to mitochondrial respiration |
| CYB5A | Cytochrome b5, electron transfer | May interact with iron-cytochrome-c reductase activity in redox pathways |
| CYB5B | Cytochrome b5 outer mitochondrial membrane | Potential electron donor/acceptor in iron metabolism |
| NDUFS1 | Complex I subunit | Iron-sulfur cluster-containing, linked to iron homeostasis |
| SDHA | Complex II subunit | Iron-sulfur cluster, affected by iron deficiency |
| ACO1 | Aconitase, iron-sulfur enzyme | Iron-dependent enzyme altered in iron deficiency |
| FTH1 | Ferritin heavy chain | Iron storage, regulates labile iron pool |
| FTL | Ferritin light chain | Iron storage, affects iron availability |
| TFRC | Transferrin receptor | Iron uptake, influences intracellular iron |
| SLC11A2 | DMT1, iron transporter | Iron transport, affects iron pools |
| HMOX1 | Heme oxygenase 1 | Heme degradation, releases iron |
| ISCU | Iron-sulfur cluster assembly | Provides iron-sulfur clusters to proteins |
| FXN | Frataxin | Mitochondrial iron homeostasis |
| ABCB7 | Mitochondrial iron export | Iron-sulfur cluster biogenesis |
| GLRX5 | Glutaredoxin 5 | Iron-sulfur cluster assembly |
| BOLA3 | Iron-sulfur cluster assembly | Mitochondrial iron metabolism |
| NFU1 | Iron-sulfur cluster assembly | Iron-sulfur protein maturation |
| LYRM4 | Iron-sulfur cluster assembly | Mitochondrial iron-sulfur biogenesis |
How Is iron-cytochrome-c reductase activity Regulated?
Iron-cytochrome-c reductase activity is regulated at multiple levels. Cellular iron status directly influences the expression of iron metabolism genes through the IRP/IRE system, affecting the availability of substrates and cofactors. In iron deficiency, tissue cytochrome c levels and iron-dependent enzyme activities are reduced, indicating that iron availability modulates this activity. In bacteria, tungsten competes with molybdenum or iron in metalloenzymes, inhibiting iron-cytochrome-c reductase activity and growth. Additionally, redox balance and oxidative stress can post-translationally modify the enzyme or its substrates, altering activity.
iron-cytochrome-c reductase activity and Human Disease
| Gene | Disease / Biology | Potential Experimental Model |
|---|---|---|
| CYCS | Mitochondrial dysfunction, apoptosis | Cycs knockout or point-mutation cell lines |
| FTH1 | Iron overload, oxidative stress | FTH1 overexpression or knockout |
| TFRC | Iron deficiency anemia | TFRC knockdown or knockout |
| HMOX1 | Heme degradation, inflammation | HMOX1 knockout or overexpression |
| ACO1 | Iron-sulfur cluster disorders | ACO1 point mutation knock-in |
Iron deficiency and mitochondrial dysfunction
Iron deficiency leads to decreased cytochrome c levels and altered iron-dependent enzyme activities in tissues, which can impair mitochondrial respiration and energy production. This highlights the importance of iron-cytochrome-c reductase activity in maintaining normal cellular function under iron-limited conditions.
Oxidative stress and neurodegeneration
Dysregulation of iron-cytochrome-c reductase activity may contribute to oxidative stress by increasing labile iron, which can promote Fenton chemistry and lipid peroxidation. Such mechanisms are implicated in neurodegenerative diseases where iron accumulation and mitochondrial dysfunction are observed.
Cancer metabolism
Altered iron metabolism and redox balance are hallmarks of cancer cells. Changes in iron-cytochrome-c reductase activity could affect cytochrome c-mediated apoptosis and cellular redox status, influencing tumor growth and survival.
Microbial pathogenesis and bioleaching
In Acidithiobacillus ferrooxidans, inhibition of iron-cytochrome-c reductase activity by tungsten disrupts iron oxidation and energy generation, affecting bacterial growth. This has implications for bioleaching and microbial pathogenesis.
From iron-cytochrome-c reductase activity-Related Genes to Experimental Models
| Research Question | Suitable Model |
|---|---|
| Does loss of iron-cytochrome-c reductase activity affect mitochondrial respiration? | CRISPR knockout of candidate genes in cell lines |
| How do point mutations in the active site alter catalytic efficiency? | CRISPR point mutation knock-in |
| Can tagged versions of the enzyme reveal its subcellular localization? | Knock-in of epitope tags |
| Does overexpression of the enzyme protect against oxidative stress? | CRISPR overexpression models |
| What is the role of iron-cytochrome-c reductase in bacterial iron oxidation? | Knockout in Acidithiobacillus ferrooxidans |
| Can small molecules modulate the activity? | High-throughput screening with reporter assays |
How to Study the iron-cytochrome-c reductase activity Process
| Method | What It Measures | Typical Application |
|---|---|---|
| Spectrophotometric enzyme assay | Catalytic activity of iron-cytochrome-c reductase | Kinetic characterization and inhibitor testing |
| CRISPR knockout screening | Gene essentiality and synthetic lethality | Identifying regulators of iron metabolism |
| RNA-seq | Transcriptional changes upon perturbation | Assessing iron homeostasis gene expression |
| Proteomics | Protein abundance and interactions | Mapping the iron-cytochrome-c reductase interactome |
| Redox imaging | Real-time redox state of iron and cytochrome c | Live-cell monitoring of oxidative stress |
| Iron quantification assays | Labile iron pool and total iron content | Evaluating iron deficiency or overload |
| Bacterial growth assays | Microbial growth under iron-oxidizing conditions | Testing tungsten inhibition |
Enzymatic activity assays
Direct measurement of iron-cytochrome-c reductase activity can be performed using spectrophotometric assays that monitor the reduction of Fe3+ or the oxidation of ferrous cytochrome c. These assays are essential for validating CRISPR models and for kinetic studies.
CRISPR screening and functional genomics
Genome-wide CRISPR knockout or activation screens can identify genes that regulate iron-cytochrome-c reductase activity or are synthetic lethal with its loss. Such screens are powerful for uncovering novel components of iron metabolism.
Proteomics and interactomics
Affinity purification coupled with mass spectrometry can identify protein interaction partners of the enzyme, revealing regulatory complexes and substrates. This approach helps place the activity within cellular networks.
Metabolic and redox imaging
Genetically encoded redox sensors and iron-sensitive fluorescent probes can monitor real-time changes in iron and cytochrome c redox states in live cells. These methods provide spatial and temporal resolution of the activity.
How CRISPR Can Be Used to Study GO:0047726 iron-cytochrome-c reductase activity
Knockout
CRISPR knockout of genes encoding iron-cytochrome-c reductase activity or its regulators can reveal their essentiality and impact on iron homeostasis and mitochondrial function. For example, knocking out CYCS or iron-sulfur cluster assembly genes can disrupt the activity and lead to metabolic defects.
Point Mutation
Introducing point mutations in the catalytic site of the enzyme can dissect the mechanism of electron transfer and identify residues critical for iron and cytochrome c binding. Such models are valuable for understanding how specific mutations affect activity and contribute to disease.
Knock-in
Knock-in of epitope tags or fluorescent proteins allows visualization and purification of the enzyme, enabling localization and interaction studies. Knock-in of disease-associated mutations can model their effects on iron-cytochrome-c reductase activity.
Overexpression
CRISPR activation or cDNA overexpression can increase iron-cytochrome-c reductase activity, allowing researchers to test whether elevated activity protects against oxidative stress or alters iron metabolism. Overexpression models are also useful for drug screening.
How EDITGENE Supports iron-cytochrome-c reductase activity Research
Researchers studying iron-cytochrome-c reductase activity-related genes often need to determine whether a candidate gene is causally involved in iron metabolism, mitochondrial function, or disease. EDITGENE provides a comprehensive suite of CRISPR-based services to generate precisely engineered cell models, enabling rigorous functional validation and mechanistic studies.
Contact EDITGENE today to design your custom CRISPR model for iron-cytochrome-c reductase activity research.
Frequently Asked Questions About iron-cytochrome-c reductase activity
What is iron-cytochrome-c reductase activity?
Iron-cytochrome-c reductase activity (GO:0047726) is a molecular function that catalyzes the reversible electron transfer between Fe3+ and Fe(II)-[cytochrome c], producing Fe2+ and Fe(III)-[cytochrome c].
What genes are involved in iron-cytochrome-c reductase activity?
Genes such as CYCS, CYB5A, FTH1, TFRC, and iron-sulfur cluster assembly genes (e.g., ISCU, FXN) are involved in iron metabolism and related redox processes.
How is iron-cytochrome-c reductase activity regulated?
It is regulated by cellular iron status through the IRP/IRE system, and in bacteria by metal competition such as tungsten inhibition [1,2].
What diseases are associated with iron-cytochrome-c reductase activity?
Dysregulation is linked to iron deficiency, oxidative stress, neurodegenerative diseases, and cancer metabolism.
How can I study iron-cytochrome-c reductase activity in the lab?
You can use enzymatic assays, CRISPR knockout or knock-in models, RNA-seq, proteomics, and redox imaging.
What is the reaction catalyzed by GO:0047726?
The reaction is Fe3+ + Fe(II)-[cytochrome c] = Fe2+ + Fe(III)-[cytochrome c].
Is iron-cytochrome-c reductase activity reversible?
Yes, the reaction is reversible and can proceed in either direction depending on the redox environment.
What are the synonyms for iron-cytochrome-c reductase activity?
Synonyms include ferrocytochrome-c:Fe3+ oxidoreductase activity and iron-cytochrome c reductase activity.
How does tungsten affect iron-cytochrome-c reductase activity?
In Acidithiobacillus ferrooxidans, tungsten inhibits iron-cytochrome-c reductase activity, leading to growth inhibition.
Can CRISPR be used to study iron-cytochrome-c reductase activity?
Yes, CRISPR knockout, point mutation, knock-in, and overexpression models are powerful tools to dissect gene function related to this activity [1,2].
Conclusion
Iron-cytochrome-c reductase activity (GO:0047726) is a fundamental molecular function that bridges iron redox chemistry and cytochrome c biology, with critical roles in cellular iron homeostasis, mitochondrial function, and microbial energy metabolism [1,2]. Dysregulation of this activity is implicated in iron deficiency, oxidative stress, and various diseases, making it an important target for research. Advances in CRISPR-based gene editing and functional genomics provide unprecedented opportunities to dissect the genes and pathways controlling this activity, paving the way for new therapeutic strategies [1,2].
References
- 1. McKay RH et al.. 1983. Tissue effects of iron deficiency in the rat.. Biochim Biophys Acta 757(3):352-8 PMID: 6303441
- 2. Sugio T et al.. 2001. Mechanism of growth inhibition by tungsten in Acidithiobacillus ferrooxidans.. Biosci Biotechnol Biochem 65(3):555-62 PMID: 11330668