GO:0047748 cholestanetetraol 26-dehydrogenase activity: Mechanism, Genes and Research Methods
Research-grade guide for scientists and biopharma professionals
Key Takeaways
• GO:0047748 cholestanetetraol 26-dehydrogenase activity is a molecular function defined by the reaction: 5beta-cholestane-3alpha,7alpha,12alpha-triol + 5 H+ + 3 O2 + 6 reduced [adrenodoxin] = (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + 4 H2O + 6 oxidized [adrenodoxin].
• The term is synonymous with 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity and TEHC-NAD oxidoreductase activity.
• Human liver alcohol dehydrogenase can act as a 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase, linking this activity to bile acid biosynthesis.
• This activity participates in the conversion of cholestanetetrol to a 26-oate intermediate during bile acid side-chain oxidation.
• Researchers study this function using enzyme kinetics, CRISPR knockout models, and metabolic flux analysis.
• Dysregulation of bile acid synthesis enzymes can contribute to cholestatic liver disease and metabolic disorders.
Description
GO:0047748 cholestanetetraol 26-dehydrogenase activity is a molecular function that catalyzes a specific step in bile acid biosynthesis, converting 5beta-cholestane-3alpha,7alpha,12alpha-triol to (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate through an adrenodoxin-dependent oxidation. This activity is essential for the proper side-chain oxidation of cholesterol derivatives, a process required for the production of mature bile acids. The enzyme responsible for this activity in humans has been studied in the context of liver alcohol dehydrogenase, which exhibits dual specificity for both alcohol and cholestanetetrol substrates. Understanding this activity is important for researchers investigating lipid metabolism, liver physiology, and metabolic disorders. The reaction consumes molecular oxygen and reduced adrenodoxin while producing water and oxidized adrenodoxin, highlighting its integration with mitochondrial electron transport systems. As a molecular function annotation, GO:0047748 provides a precise biochemical definition that enables functional genomics and enzyme engineering studies.
cholestanetetraol 26-dehydrogenase activity At A Glance
| GO ID | GO:0047748 |
|---|---|
| GO term | cholestanetetraol 26-dehydrogenase activity |
| Ontology | molecular_function |
| Synonym | 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity; TEHC-NAD oxidoreductase activity |
| Major function | Catalyzes the oxidation of cholestanetetrol to a 26-oate intermediate in bile acid biosynthesis |
| Reaction participants | 5beta-cholestane-3alpha,7alpha,12alpha-triol; 5 H+; 3 O2; 6 reduced [adrenodoxin] |
| Reaction products | (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate; 4 H2O; 6 oxidized [adrenodoxin] |
| Cofactor | Adrenodoxin (reduced form) |
| Associated enzyme | Human liver alcohol dehydrogenase (can exhibit this activity) |
What Is GO:0047748?
In our own words, GO:0047748 cholestanetetraol 26-dehydrogenase activity describes the catalytic conversion of 5beta-cholestane-3alpha,7alpha,12alpha-triol into (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate. This reaction requires five protons, three molecules of molecular oxygen, and six reduced adrenodoxin molecules, yielding four water molecules and six oxidized adrenodoxin molecules. The activity is synonymous with 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase and TEHC-NAD oxidoreductase activity, reflecting its role in steroid side-chain oxidation.
Why Is cholestanetetraol 26-dehydrogenase activity Important in Cell Biology?
GO:0047748 cholestanetetraol 26-dehydrogenase activity is critical for bile acid biosynthesis, a fundamental metabolic pathway that enables the absorption of dietary fats and fat-soluble vitamins. The enzyme responsible for this activity, human liver alcohol dehydrogenase, has been shown to catalyze the dehydrogenation of 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol, linking alcohol metabolism to sterol side-chain oxidation. Defects in bile acid synthesis can lead to cholestatic liver disease, neurological symptoms, and fat malabsorption. Therefore, understanding this activity at the molecular level provides insights into metabolic regulation and potential therapeutic targets.
• Essential for bile acid biosynthesis and cholesterol catabolism.
• Links alcohol dehydrogenase function to sterol metabolism.
• Involved in the side-chain oxidation of cholestanetetrol to a 26-oate intermediate.
• Requires adrenodoxin as an electron carrier, connecting to mitochondrial redox systems.
• Dysregulation may contribute to cholestatic liver diseases and metabolic disorders.
• Provides a target for studying enzyme promiscuity and substrate specificity.
• Relevant for drug metabolism studies due to alcohol dehydrogenase involvement.
• Enables functional annotation in genome-scale metabolic models.
• Supports research on inherited bile acid synthesis defects.
• Facilitates CRISPR-based knockout studies to dissect metabolic pathways.
What Happens During cholestanetetraol 26-dehydrogenase activity?
Substrate binding and initial oxidation
In simple terms: The enzyme grabs the cholestanetetrol molecule and starts removing electrons.
The reaction begins with the binding of 5beta-cholestane-3alpha,7alpha,12alpha-triol to the active site of the enzyme. Human liver alcohol dehydrogenase has been shown to accept this substrate and catalyze its dehydrogenation. This step involves the removal of hydride equivalents, initiating the oxidation of the side chain.
Adrenodoxin-mediated electron transfer
In simple terms: Electrons are passed to adrenodoxin, which carries them away.
The oxidation reaction requires six reduced adrenodoxin molecules, which act as electron acceptors. These electrons are transferred from the substrate to adrenodoxin, resulting in its oxidized form. This coupling to adrenodoxin highlights the integration of this activity with mitochondrial electron transport.
Oxygen consumption and water production
In simple terms: Oxygen is used up, and water is produced as a byproduct.
Three molecules of molecular oxygen are consumed during the reaction, and four molecules of water are generated. This stoichiometry is defined in the GO term and reflects the oxidative nature of the side-chain modification.
Formation of the 26-oate product
In simple terms: The final product is a cholestan-26-oate, ready for further bile acid processing.
The reaction yields (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate, a key intermediate in bile acid biosynthesis. This product can undergo subsequent modifications to form mature bile acids. The stereochemistry at C-25 is specified as 25R, indicating the enzyme's stereospecificity.
Key Genes Involved in GO:0047748 cholestanetetraol 26-dehydrogenase activity
The following genes and proteins are associated with cholestanetetraol 26-dehydrogenase activity or related bile acid synthesis pathways.
| Gene | Major Role | Research Relevance |
|---|---|---|
| ADH1B | Alcohol dehydrogenase, can exhibit cholestanetetrol dehydrogenase activity | Studied for dual substrate specificity and bile acid synthesis |
| ADH1A | Alcohol dehydrogenase, potential overlapping activity | Investigated for metabolic roles in liver |
| ADH1C | Alcohol dehydrogenase, potential overlapping activity | Polymorphisms linked to alcohol metabolism and liver disease |
| ADH4 | Alcohol dehydrogenase, class II | May contribute to retinol and steroid metabolism |
| ADH5 | Alcohol dehydrogenase, class III | Involved in formaldehyde detoxification |
| ADH6 | Alcohol dehydrogenase, class V | Poorly characterized, potential steroid dehydrogenase |
| ADH7 | Alcohol dehydrogenase, class IV | Expressed in stomach, retinol metabolism |
| CYP27A1 | Sterol 27-hydroxylase, alternative bile acid pathway | Mutations cause cerebrotendinous xanthomatosis |
| CYP7A1 | Cholesterol 7-alpha-hydroxylase, rate-limiting bile acid synthesis | Target for hypercholesterolemia research |
| CYP8B1 | Sterol 12-alpha-hydroxylase | Determines bile acid composition |
| AKR1D1 | Delta4-3-oxosteroid 5beta-reductase | Deficiency causes bile acid synthesis defects |
| HSD3B7 | 3-beta-hydroxysteroid dehydrogenase | Involved in bile acid synthesis |
| SLC27A5 | Bile acyl-CoA synthetase | Activates bile acids for conjugation |
| BAAT | Bile acid-CoA:amino acid N-acyltransferase | Conjugates bile acids with glycine or taurine |
| NR1H4 | Farnesoid X receptor, regulates bile acid homeostasis | Drug target for cholestasis |
| FDXR | Ferredoxin reductase, supplies electrons to adrenodoxin | Supports mitochondrial P450 and dehydrogenase reactions |
| FDX1 | Adrenodoxin, electron carrier | Essential for adrenal steroidogenesis and bile acid synthesis |
| CYP7B1 | Oxysterol 7-alpha-hydroxylase | Alternative bile acid pathway, neurosteroid metabolism |
How Is cholestanetetraol 26-dehydrogenase activity Regulated?
The activity of cholestanetetraol 26-dehydrogenase is regulated at multiple levels. Human liver alcohol dehydrogenase, which can catalyze this reaction, is subject to transcriptional regulation by factors such as C/EBP and HNF4. Additionally, the availability of adrenodoxin and its redox state influence the reaction rate. Bile acid synthesis is feedback-inhibited by farnesoid X receptor (FXR) signaling, which downregulates CYP7A1 and other enzymes. However, direct regulation of the dehydrogenase step by nuclear receptors or post-translational modifications remains to be fully elucidated.
cholestanetetraol 26-dehydrogenase activity and Human Disease
| Gene | Disease / Biology | Potential Experimental Model |
|---|---|---|
| ADH1B | Altered bile acid synthesis, alcohol-related liver disease | CRISPR knockout in HepG2 cells |
| CYP27A1 | Cerebrotendinous xanthomatosis | Knockout mouse model |
| CYP7A1 | Hypercholesterolemia, gallstone disease | Liver-specific knockout mice |
| AKR1D1 | Bile acid synthesis defect, neonatal cholestasis | Patient-derived iPSC hepatocytes |
| NR1H4 | Cholestasis, metabolic syndrome | FXR knockout mice |
Cholestatic liver disease
Impaired bile acid synthesis due to defects in side-chain oxidation can lead to cholestasis, characterized by bile flow obstruction and liver damage. Although direct mutations in the dehydrogenase activity are not well documented, alcohol dehydrogenase variants have been associated with altered bile acid profiles. Understanding this activity may reveal new therapeutic targets for cholestatic disorders.
Metabolic disorders
Alterations in bile acid synthesis contribute to metabolic syndrome, obesity, and diabetes. The dehydrogenase activity, by influencing bile acid pool composition, may affect glucose and lipid homeostasis. Studies on alcohol dehydrogenase substrate specificity provide a foundation for investigating these links.
Neurological disorders
Bile acid synthesis defects often present with neurological symptoms due to accumulation of toxic intermediates. The 26-oate product of this reaction is a precursor to neuroactive steroids. Dysregulation of the dehydrogenase step could potentially impact brain function, though direct evidence is limited.
From cholestanetetraol 26-dehydrogenase activity-Related Genes to Experimental Models
| Research Question | Suitable Model |
|---|---|
| Does ADH1B catalyze cholestanetetrol dehydrogenation in vivo? | ADH1B knockout mouse |
| What is the kinetic mechanism of the dehydrogenase? | Purified recombinant ADH1B enzyme assays |
| How does the 26-oate product affect bile acid pool? | Knock-in of tagged ADH1B in HepG2 |
| Can point mutations alter substrate specificity? | Site-directed mutagenesis of ADH1B |
| What is the role of adrenodoxin in the reaction? | FDX1 knockdown in liver cells |
| Does overexpression of ADH1B increase bile acid synthesis? | Adenoviral overexpression in primary hepatocytes |
How to Study the cholestanetetraol 26-dehydrogenase activity Process
| Method | What It Measures | Typical Application |
|---|---|---|
| Enzyme kinetics | Catalytic activity and substrate affinity | Characterizing ADH1B variants |
| CRISPR knockout | Gene function loss | Dissecting metabolic pathways |
| LC-MS metabolomics | Bile acid intermediates | Quantifying 26-oate production |
| RNA-seq | Gene expression changes | Identifying co-regulated genes |
| Proteomics | Protein abundance and modifications | Validating enzyme expression |
| HPLC-MS | Bile acid composition | Analyzing in vivo models |
| Site-directed mutagenesis | Structure-function relationships | Mapping active site residues |
Enzyme kinetics and substrate specificity
Recombinant human liver alcohol dehydrogenase can be assayed for cholestanetetrol dehydrogenase activity using spectrophotometric methods that monitor NADH production or adrenodoxin reduction. Kinetic parameters such as Km and Vmax provide insights into substrate affinity and catalytic efficiency.
CRISPR knockout and metabolic profiling
CRISPR-Cas9 knockout of candidate genes such as ADH1B in liver cell lines allows researchers to assess the contribution of specific enzymes to cholestanetetrol oxidation. Metabolomic profiling by LC-MS can quantify bile acid intermediates and products.
Transcriptomics and proteomics
RNA-seq and quantitative proteomics can reveal co-expression patterns of ADH1B with bile acid synthesis enzymes. These approaches help identify regulatory networks and potential compensatory pathways.
In vivo models and bile acid analysis
Mouse models with liver-specific deletions of ADH1B or related genes enable in vivo studies of bile acid metabolism. Bile can be collected for analysis of bile acid composition by HPLC-MS.
How CRISPR Can Be Used to Study GO:0047748 cholestanetetraol 26-dehydrogenase activity
Knockout
CRISPR knockout of ADH1B in HepG2 or primary hepatocytes can abolish cholestanetetrol dehydrogenase activity, allowing researchers to measure the impact on bile acid synthesis. This approach is ideal for validating the enzyme's role in the pathway.
Point Mutation
Introducing point mutations in the ADH1B active site can reveal residues critical for cholestanetetrol binding and catalysis. For example, mutating the zinc-coordinating cysteines may disrupt activity, providing mechanistic insights.
Knock-in
Knock-in of a tagged ADH1B allele (e.g., FLAG or GFP) enables affinity purification and localization studies. This can confirm mitochondrial or cytosolic localization and identify interacting proteins.
Overexpression
Overexpression of ADH1B in cell lines can enhance flux through the bile acid synthesis pathway, increasing production of the 26-oate intermediate. This model is useful for studying metabolic flux and substrate competition.
How EDITGENE Supports cholestanetetraol 26-dehydrogenase activity Research
Researchers studying cholestanetetraol 26-dehydrogenase activity-related genes often need to determine whether a candidate gene is causally involved in bile acid synthesis or metabolic regulation. EDITGENE provides comprehensive CRISPR services to accelerate this research.
Contact EDITGENE today to design your custom CRISPR model for cholestanetetraol 26-dehydrogenase activity research.
Frequently Asked Questions About cholestanetetraol 26-dehydrogenase activity
What is cholestanetetraol 26-dehydrogenase activity?
It is a molecular function defined by GO:0047748 that catalyzes the oxidation of 5beta-cholestane-3alpha,7alpha,12alpha-triol to (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate, using adrenodoxin as an electron acceptor.
What genes are involved in cholestanetetraol 26-dehydrogenase activity?
Human liver alcohol dehydrogenase, encoded by ADH1B, can exhibit this activity. Other alcohol dehydrogenase genes may also contribute.
What is the reaction catalyzed by GO:0047748?
The reaction is: 5beta-cholestane-3alpha,7alpha,12alpha-triol + 5 H+ + 3 O2 + 6 reduced [adrenodoxin] = (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate + 4 H2O + 6 oxidized [adrenodoxin].
What are the synonyms for cholestanetetraol 26-dehydrogenase activity?
Synonyms include 5beta-cholestane-3alpha,7alpha,12alpha,26-tetrol dehydrogenase activity and TEHC-NAD oxidoreductase activity.
How is cholestanetetraol 26-dehydrogenase activity studied?
It is studied using enzyme kinetics with recombinant ADH1B, CRISPR knockout models, and metabolomic profiling of bile acids.
What diseases are associated with defects in this activity?
Defects in bile acid synthesis can cause cholestatic liver disease, metabolic disorders, and neurological symptoms. ADH1B variants may influence bile acid profiles.
What cofactors are required for cholestanetetraol 26-dehydrogenase activity?
The reaction requires adrenodoxin in its reduced form as an electron carrier, and molecular oxygen.
Can CRISPR be used to study cholestanetetraol 26-dehydrogenase activity?
Yes, CRISPR knockout of ADH1B or related genes in liver cells can abolish the activity and reveal its role in bile acid synthesis.
What is the cellular location of cholestanetetraol 26-dehydrogenase activity?
The activity is associated with bile acid biosynthesis, which occurs in the liver, primarily in mitochondria and cytosol. Adrenodoxin involvement suggests mitochondrial localization.
How does cholestanetetraol 26-dehydrogenase activity relate to alcohol metabolism?
Human liver alcohol dehydrogenase, which metabolizes alcohol, also catalyzes this reaction, indicating substrate promiscuity.
Conclusion
GO:0047748 cholestanetetraol 26-dehydrogenase activity represents a key enzymatic step in bile acid biosynthesis, with human liver alcohol dehydrogenase serving as a notable catalyst. Understanding its mechanism, regulation, and role in disease provides a foundation for metabolic research and therapeutic development. CRISPR-based models offer powerful tools to dissect this activity and its contribution to liver physiology.
References
- 1. Okuda A et al.. 1983. Physiological function and kinetic mechanism of human liver alcohol dehydrogenase as 5 beta-cholestane-3 alpha,7 alpha,12 alpha,26-tetrol dehydrogenase.. J Biol Chem 258(5):2899-905 PMID: 6338006