TRIM21 Knockout A-549 Cell Line

TRIM21 Knockout A-549 Cell Line
Cat.No.:

EDC07660

Species:

Human

Cell Name:

A-549

Gene:

TRIM21

Gene ID:

6737

Size:

1×10⁶cells

TRIM21 Knockout Cell Line (A549) is an exclusive upgraded CRISPR/Cas9 system-mediated gene knockout cell, with the advantages of Optimized Strategy Design, Efficient Cell Transfection, High-Performance Cas9 Protein and Hassle-Free Cell Selection.
Cat.No. EDC07660
Product Name TRIM21 Knockout A549 Cell Line
Cell Line A-549
Cellosaurus ID CVCL_0023
Cell Line Synonyms A 549, A549, NCI-A549, A549/ATCC, A549 ATCC, A549ATCC, hA549
Gene TRIM21
NCBI Gene ID
Gene Synonyms RNF81|RO52|Ro/SSA|SSA|SSA1
Summary
This gene encodes a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The encoded protein is part of the RoSSA ribonucleoprotein, which includes a single polypeptide and one of four small RNA molecules. The RoSSA particle localizes to both the cytoplasm and the nucleus. RoSSA interacts with autoantigens in patients with Sjogren syndrome and systemic lupus erythematosus. Alternatively spliced transcript variants for this gene have been described but the full-length nature of only one has been determined. [provided by RefSeq, Jul 2008]
Associated Diseases Non-Small Cell Lung Carcinoma
Morphology Adherent
Passage Ratio 1/5-1/4 ,2days
Complete Culture Medium F-12K + 10% FBS
Freezing Medium 95% Complete culture medium + 5% DMSO
QC Indels validated by Sanger sequencing; sterility confirmed via microbial testing.
* For research use only. Not intended for use in humans or animals, including clinical, therapeutic, or diagnostic purposes.
LociSTR Info (Sample Cell)
Sample Cell Line: A-549
STR Info (Cell bank)
Cell Line: A-549
Allele1Allele2Allele1Allele2
Amelogenin X Y X Y
CSF1PO 10 12 10 12
D2S1338 24 24
D3S1358 16 16
D5S818 11 11
D7S820 8 11 8 11
D8S1179 13 14 13 14
D13S317 11 11
D16S539 11 12 11 12
D18S51 14 17 14 17
D19S433 13 13
D21S11 29 29
FGA 23 23
Penta D 9 9
Penta E 7 11 7 11
TH01 8 9.3 8 9.3
TPOX 8 11 8 11
vWA 14 14
D6S1043 11 13
D12S391 18 18
D2S441 10 13 10 13
* STR authentication data of this cell line matches with that of cell lines sourced from ATCC, DSMZ, JCRB, and RIKEN databases.
Conclusion: The STR identification of this cell is correct.

FAQ

The choice depends on whether you are studying TRIM21's role in intracellular antiviral immunity, particularly in the respiratory pathogen context. The Knockout line is the appropriate tool for asking whether TRIM21 is required for antibody-dependent neutralization of viruses that infect respiratory epithelium. Overexpression is useful for testing whether elevated TRIM21 enhances antibody-mediated neutralization, particularly relevant for emerging respiratory pathogens. For respiratory virus research, the EDITGENE TRIM21 Knockout in A-549 is particularly valuable — A-549 supports replication of many respiratory viruses (adenovirus, influenza, SARS-CoV-2), enabling direct testing of TRIM21's protective antiviral functions in a disease-relevant cellular context. Rescue with wild-type or RING-dead TRIM21 is the standard approach for distinguishing antibody-binding from E3 ligase functions.
Primary applications: • Respiratory virus neutralization: TRIM21-dependent antibody-mediated neutralization assays for viruses that infect respiratory epithelium (adenovirus, influenza, SARS-CoV-2). • Antibody-coated virus clearance: imaging-based analysis of virus-antibody complex degradation kinetics in the absence of TRIM21. • Innate immune signaling: NF-κB and IRF3 activation downstream of TRIM21-mediated K63-ubiquitin signaling during viral infection. • Therapeutic antibody efficacy: assessment of how TRIM21 status influences the intracellular efficacy of therapeutic antibodies in a respiratory disease-relevant cellular context. EDITGENE recommends this model for researchers investigating antibody-mediated antiviral immunity in respiratory virus infection contexts.
Yes. TRIM21 rescue experiments in A-549 are particularly suited to antiviral immunity studies: • Construct design: use a codon-modified TRIM21 sequence with a C-terminal tag (FLAG, HA). Standard TRIM21 expression vectors work well in A-549. • Antiviral function rescue: the principal functional readout for A-549 context is restoration of antibody-mediated intracellular virus neutralization — assays should use antibody-coated virus challenge (adenovirus is the canonical TRIM21 substrate). • Structure-function variants: RING-dead (C16/15A) and Fc-binding-deficient (H433A) TRIM21 dissect E3 ligase versus antibody-binding functions in the respiratory virus infection context. • Functional readout: viral replication assays in rescue cells compared to knockout and parental lines, with and without virus-specific antibody, quantify TRIM21's antiviral contribution. A-549 transduces with lentivirus at standard efficiency for adherent cancer lines and supports stable TRIM21 rescue line generation.
* Research Use Disclaimer: Content is generated from publicly available research data, bioinformatic resources, and computational analyses for research reference only.

Related Publications

IF=5.3
American journal of respiratory cell and molecular biology
Acute respiratory infections caused by influenza A virus (IAV) spread widely and lead to substantial morbidity and mortality. Host cell induction of type I interferon (IFN-I) plays a fundamental role in eliminating the virus during the innate antiviral response. The potential role of N-myc and STAT interactor (NMI) and its underlying mechanisms of action during IAV infection, however, remain elusive. In this study, we found that the expression of NMI increased after IAV infection. -knockout mice infected with IAV displayed increased survival rate, decreased weight loss, lower viral replication, and attenuated lung inflammation when compared with wild-type mice. Deficiency of NMI promoted the production of IFN-I and IFN-stimulated genes and . Reduced levels of NMI also resulted in an increase of the expression of IFN regulator factor (IRF) 7. Further studies have revealed that NMI could interact with IRF7 after IAV infection, and this interaction involved its NID1 and NID2 domain. In addition, NMI facilitated ubiquitination and proteasome-dependent degradation of IRF7 through recruitment of the E3 ubiquitin ligase TRIM21 (tripartite motif-containing 21) to limit the IAV-triggered innate immunity. Our findings reveal a clearer understanding of the role of NMI in regulating the host innate antiviral response and provide a potential therapeutic target for controlling IAV infection.
IF=5
Inflammation
Acute lung injury (ALI) is a severe complication of sepsis, and its underlying pathological mechanisms remain poorly understood. This study aims to investigate the role and mechanisms by which IRGM mediates autophagy through the regulation of the AKT/mTOR signaling pathway in sepsis-induced ALI. Initially, a sepsis-induced ALI mouse model was established using cecal ligation and puncture (CLP). Our results demonstrated that Irgm1 expression was significantly upregulated in the ALI model. Subsequently, Irgm1 was knocked down in vivo using AAV vectors, and changes in ALI symptoms were assessed. In vitro, a sepsis-induced ALI cell model was generated by stimulating A549 cells with lipopolysaccharide (LPS). The effects of IRGM overexpression on autophagy and apoptosis were evaluated, and its impact on the AKT/mTOR signaling pathway was analyzed. Furthermore, mass spectrometry and co-immunoprecipitation (COIP) experiments were conducted to explore the interaction between IRGM and TRIM21. In vivo results showed that Irgm1 knockout exacerbated CLP-induced ALI, as evidenced by a significant reduction in autophagic activity, increased apoptosis, and aberrant activation of the AKT/mTOR pathway. Further cellular experiments suggested that IRGM may enhance autophagy by inhibiting the AKT/mTOR signaling pathway, thereby attenuating LPS-induced cell damage. Additionally, COIP experiments revealed that IRGM interacts with TRIM21 to inhibit AKT/mTOR pathway activation, thereby promoting autophagy and mitigating sepsis-induced ALI. In conclusion, IRGM regulates autophagy through the AKT/mTOR signaling pathway and exerts protective effects in sepsis-induced ALI, suggesting that it may serve as a potential therapeutic target for sepsis-related ALI.

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