PMS1 Knockout HEK293 Cell Line
Cat.No.:
EDC90185
Species:
Human
Cell Name:
HEK293
Gene:
PMS1
Gene ID:
5378
Size:
1×10⁶cells
PMS1 Knockout Cell Line (HEK293) is an exclusive upgraded CRISPR/Cas9 system-mediated gene knockout cell, with the advantages of Optimized Strategy Design, Efficient Cell Transfection, High-Performance Cas9 Protein and Hassle-Free Cell Selection.
| Cat.No. | EDC90185 |
|---|---|
| Product Name | PMS1 Knockout Cell Line (HEK293) |
| Cell Line | HEK293 |
| Cellosaurus ID | CVCL_0045 |
| Cell Line Synonyms | Hek293, HEK-293, HEK/293, (HEK)293, HEK 293, HEK,293, 293, 293 HEK, 293 Ad5, Graham 293, Graham-293, Human Embryonic Kidney 293 |
| Gene | PMS1 |
| NCBI Gene ID | |
| Gene Synonyms | HNPCC3|MLH2|PMSL1|hPMS1 |
| Summary |
This gene encodes a protein belonging to the DNA mismatch repair mutL/hexB family. This protein is thought to be involved in the repair of DNA mismatches, and it can form heterodimers with MLH1, a known DNA mismatch repair protein. Mutations in this gene cause hereditary nonpolyposis colorectal cancer type 3 (HNPCC3) either alone or in combination with mutations in other genes involved in the HNPCC phenotype, which is also known as Lynch syndrome. [provided by RefSeq, Jul 2008]
|
| Associated Diseases | Non-tumor |
| Morphology | Adherent |
| Passage Ratio | 1/5,2days |
| Complete Culture Medium | DMEM + 10% FBS |
| Freezing Medium | 95% Complete culture medium+ 5% DMSO |
| QC | Indels validated by Sanger sequencing; sterility confirmed via microbial testing. |
* For research use only. Not intended for use in humans or animals, including clinical, therapeutic, or diagnostic purposes.
| Loci | STR Info (Sample Cell) Sample Cell Line: HEK293 | STR Info (Cell bank) Cell Line: HEK293 | ||
| Allele1 | Allele2 | Allele1 | Allele2 | |
| Amelogenin | X | X | ||
| CSF1P0 | 12 | 11 | 12 | |
| D2S1338 | 19 | 19 | ||
| D3S1358 | 15 | 17 | 15 | 17 |
| D5S818 | 8 | 8 | 9 | |
| D7S820 | 11 | 12 | 11 | 12 |
| D8S1179 | 12 | 14 | 12 | 14 |
| D13S317 | 12 | 14 | 12 | 14 |
| D16S539 | 9 | 13 | 9 | 13 |
| D18S51 | 17 | 18 | 17 | 18 |
| D19S433 | 15 | 18 | 15 | 18 |
| D21S11 | 28 | 30.2 | 28 | 30.2 |
| FGA | 23 | 23 | ||
| Penta D | 9 | 10 | 9 | 10 |
| Penta E | 7 | 15 | 7 | 15 |
| TH01 | 7 | 9.3 | 7 | 9.3 |
| TPOX | 11 | 11 | ||
| vWA | 16 | 19 | 16 | 19 |
| D6S1043 | 11 | 11 | ||
| D12S391 | 19 | 21 | 11 | 15 |
| D2S441 | 11 | 15 | 11 | 15 |
* STR authentication data of this cell line matches with that of cell lines sourced from ATCC, DSMZ, JCRB, and RIKEN databases.
Conclusion: The STR identification of this cell is correct.
Conclusion: The STR identification of this cell is correct.
FAQ
Which is better for studying PMS1 function, PMS1 Knockout HEK293 Cell Line or PMS1 overexpression HEK293 Cell Line?
The choice depends on whether you are studying PMS1's role as the minor MutLβ partner of MLH1 or its less-characterized functions distinct from PMS2 (MutLα). The Knockout line is appropriate for asking whether PMS1 is required for these activities — PMS1 partners with MLH1 to form MutLβ, which is much less abundant than MutLα and whose contribution to mismatch repair has been controversial; recent studies suggest specialized functions in certain repair contexts. Overexpression is useful for studying PMS1-specific functions in heterologous expression contexts.
Important consideration: despite the gene name similarity, PMS1 contributes substantially less to mismatch repair than PMS2 — single PMS1 knockout typically shows modest MMR phenotypes. PMS1 was historically considered a Lynch syndrome gene but is no longer classified as such by major consensus criteria. Rescue with wild-type PMS1 is the standard specificity control. The knockout is valuable for characterizing the specialized roles of MutLβ in DNA repair distinct from MutLα.
What are the application scenarios for this model?
Primary applications:
• MutLβ-specific functions: in vitro MMR reconstitution assays to characterize MutLβ contributions distinct from MutLα.
• MutLα/MutLβ partitioning studies: MLH1 binding partner analysis to characterize how MLH1 is shared between PMS2 and PMS1.
• DNA repair phenotypes: assessment of mutational signatures and DNA damage sensitivity given PMS1's reported specialized repair functions.
• PMS2 versus PMS1 comparison: parallel analysis with the PMS2 Knockout in HEK293 (also available) for comprehensive MutL family dissection.
EDITGENE recommends this model for researchers investigating MutLβ-specific DNA repair biology and MLH1 partner specialization.
Is this PMS1 Knockout HEK293 Cell Line compatible with overexpression rescue experiments?
Yes. PMS1 rescue experiments require attention to MLH1 partnership:
• Construct design: use a codon-modified PMS1 sequence with a small C-terminal tag (FLAG, HA). PMS1 has the canonical MutL family architecture with N-terminal ATPase domain and C-terminal MLH1-interaction region — preserve both.
• MLH1 partnership: PMS1 requires MLH1 for MutLβ formation — rescue interpretation should consider MLH1 expression and MutLα versus MutLβ competition.
• Discovery-oriented rescue: parallel wild-type rescue helps distinguish PMS1-dependent phenotypes given its specialized rather than canonical MMR role.
• Functional readout: rescue should restore MutLβ-specific repair activities; classical MMR readouts may be less informative than for PMS2 rescue.
HEK293 transduces efficiently with lentivirus and supports stable rescue line generation.
* Research Use Disclaimer: Content is generated from publicly available research data, bioinformatic resources, and computational analyses for research reference only.
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